RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Maats1Q8BRC6 783 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ccdc113Q8C5T8 377 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Q8CEZ4 452 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Rbm41Q8JZV4 413 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Med24Q99K74 987 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 CoasyQ9DBL7 563 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Kcnh7Q9ER47 1195 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Knop1Q9Z2Q2 478 aaKnown RBP17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Mms22lB1AUR6 1238 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Abcd1P48410 736 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Pdrg1P59048 133 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Armcx3Q8BHS6 379 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Rpap2Q8VC34 614 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 HlcsQ920N2 722 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 4930548H24RikQ9D496 437 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Lrp2bpQ9D4C6 346 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Cmtr1Q9DBC3 837 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 SerhlQ9EPB5 311 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Zfp984A2A7A2 547 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Epb41l4aP52963 686 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Rsad1Q5SUV1 442 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ttc26Q8BS45 554 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Il21rQ9JHX3 529 aa17.55■□□□□ 0.4
Trim39-203ENSMUST00000113706 Rexo5D3YW29 759 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Erbb2P70424 1256 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Scarf1Q5ND28 820 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 NkrfQ8BY02 690 aaKnown RBP17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Dph6Q9CQ28 267 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 PpihQ9D868 188 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Rsrc2A2RTL5 376 aaKnown RBP17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Gm28042B7ZCM9 1014 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 NpcdF8VQB8 469 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Eps15P42567 897 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Dync1li2Q6PDL0 492 aaKnown RBP17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 March6Q6ZQ89 909 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Spag5Q7TME2 1165 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Phldb2Q8K1N2 1249 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Spata4Q8K3V1 295 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Stard7Q8R1R3 373 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Myl7Q9QVP4 175 aa17.54■□□□□ 0.4
Trim39-203ENSMUST00000113706 Sec14l1A8Y5H7 715 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Trim43cP86449 446 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ndst4Q9EQW8 872 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Actn3O88990 900 aaKnown RBP17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Nkx2-5P42582 318 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Rit2P70425 217 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 EregQ61521 162 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ccdc148Q6P5U8 527 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ankrd24Q80VM7 985 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 GanQ8CA72 597 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Kif17Q99PW8 1038 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Npm3Q9CPP0 175 aaKnown RBP17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Fam205aA2APU8 1308 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Scgb2b11A0A087WR49 112 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Nlrp4cQ3TKR3 982 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Hspa4Q61316 841 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Lrrn2Q6PHP6 730 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Atg4cQ811C2 458 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Bbs7Q8K2G4 715 aa17.53■□□□□ 0.4
Trim39-203ENSMUST00000113706 Brca1P48754 1812 aa17.52■□□□□ 0.4
Trim39-203ENSMUST00000113706 Cpb1B2RS76 415 aa17.52■□□□□ 0.4
Trim39-203ENSMUST00000113706 RaraP11416 462 aa17.52■□□□□ 0.4
Trim39-203ENSMUST00000113706 Epha7Q61772 998 aa17.52■□□□□ 0.4
Trim39-203ENSMUST00000113706 Q66JV7 365 aa17.52■□□□□ 0.4
Trim39-203ENSMUST00000113706 Ddx55Q6ZPL9 600 aaKnown RBP17.52■□□□□ 0.4
Trim39-203ENSMUST00000113706 Usp17leQ7M764 540 aa17.52■□□□□ 0.4
Trim39-203ENSMUST00000113706 Cyp26b1Q811W2 512 aa17.52■□□□□ 0.4
Trim39-203ENSMUST00000113706 Bcas3Q8CCN5 928 aa17.52■□□□□ 0.4
Trim39-203ENSMUST00000113706 Vmn2r78K7N6U5 853 aa17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 Dhx15O35286 795 aaKnown RBP17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 Cst8P32766 142 aa17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 Fdxacb1Q3UY23 622 aa17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 4933427I04RikQ3V053 235 aa17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 Fam183bQ5NC57 135 aa17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 Slc17a8Q8BFU8 601 aa17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 Senp7Q8BUH8 1037 aa17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 DnerQ8JZM4 737 aa17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 Stap2Q8R0L1 411 aa17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 Map3k20Q9ESL4 802 aaKnown RBP17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 Cabp5Q9JLK3 173 aa17.52■□□□□ 0.39
Trim39-203ENSMUST00000113706 Gm1993A6X8I0 212 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 SlxD3Z347 212 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 ByslO54825 436 aaKnown RBP17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Emc10Q3TAS6 258 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Eepd1Q3TGW2 569 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Znf697Q569E7 569 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Nipa1Q8BHK1 323 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Ppfibp1Q8C8U0 969 aaKnown RBP17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Pstpip2Q99M15 334 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Tmem192Q9CXT7 266 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Add1Q9QYC0 735 aaKnown RBP17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Gm4758L7N258 96 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 En2P09066 324 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Hoxc13P50207 328 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Traf5P70191 558 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Pnpla2Q8BJ56 486 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Sun2Q8BJS4 731 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Hgh1Q8C3I8 393 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Lig1P37913 916 aa17.51■□□□□ 0.39
Trim39-203ENSMUST00000113706 Phc3Q8CHP6 981 aa17.51■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms