RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Grm4Q68EF4 912 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Haus6Q6NV99 933 aaKnown RBP20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Garem2Q6PAJ3 880 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Zfp341Q6PGC9 846 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Ndst4Q9EQW8 872 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Trp53inp1Q9QXE4 239 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 S1pr4Q9Z0L1 386 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Nck2O55033 380 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Tcp1P11983 556 aaKnown RBP20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Kdm7aQ3UWM4 940 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Pla2g4eQ50L42 875 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Zrsr2Q62377 462 aaKnown RBP20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Krit1Q6S5J6 736 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Rcor2Q8C796 523 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Cdan1Q8CC12 1239 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Grin3bQ91ZU9 1003 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Slc26a4Q9R155 780 aa20.15■□□□□ 0.82
Trim47-202ENSMUST00000106441 Gm28919A0A087WP35 240 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Ppp1r7Q3UM45 361 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Tnni3kQ5GIG6 834 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Arhgef2Q60875 985 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Npdc1Q64322 332 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Sv2cQ69ZS6 727 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Lca5Q80ST9 704 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Sorbs3Q9R1Z8 733 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Knop1Q9Z2Q2 478 aaKnown RBP20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Has3O08650 554 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 PtgdrP70263 357 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Pstpip1P97814 415 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Sap30bpQ02614 308 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Swap70Q6A028 585 aaKnown RBP20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Cep70Q6IQY5 616 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 BcrQ6PAJ1 1270 aa20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Snip1Q8BIZ6 383 aaKnown RBP20.14■□□□□ 0.81
Trim47-202ENSMUST00000106441 Adgrg6Q6F3F9 1165 aa20.13■□□□□ 0.81
Trim47-202ENSMUST00000106441 Trpv1Q704Y3 839 aa20.13■□□□□ 0.81
Trim47-202ENSMUST00000106441 Zc3h6Q8BYK8 1177 aa20.13■□□□□ 0.81
Trim47-202ENSMUST00000106441 Riox2Q8CD15 465 aa20.13■□□□□ 0.81
Trim47-202ENSMUST00000106441 SltmQ8CH25 1031 aaKnown RBP20.13■□□□□ 0.81
Trim47-202ENSMUST00000106441 RpainQ9CWY9 219 aa20.13■□□□□ 0.81
Trim47-202ENSMUST00000106441 Peg12Q9WVA7 283 aa20.13■□□□□ 0.81
Trim47-202ENSMUST00000106441 Fxr2Q9WVR4 673 aaKnown RBP20.13■□□□□ 0.81
Trim47-202ENSMUST00000106441 JcadQ5DTX6 1320 aa20.13■□□□□ 0.81
Trim47-202ENSMUST00000106441 Gm30191A0A0U1RNT7 187 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Pdrg1P59048 133 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Pnma5Q5DTT8 618 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Kcnj11Q61743 390 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Nlgn2Q69ZK9 836 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Antxr2Q6DFX2 487 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Eif4a3Q91VC3 411 aaKnown RBP20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Copb2O55029 905 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Mboat4P0C7A3 435 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 PtpraP18052 829 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Pla2g4aP47713 748 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Znf219Q6IQX8 726 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Haus4Q8BFT2 363 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Fam177a1Q8BR63 207 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 AdpgkQ8VDL4 496 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Psmd2Q8VDM4 908 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Osbpl1aQ91XL9 950 aa20.12■□□□□ 0.81
Trim47-202ENSMUST00000106441 Cct5P80316 541 aaKnown RBP20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Ankrd13cQ3UX43 541 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Kctd1Q5M956 257 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 NntQ61941 1086 aaKnown RBP20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Tlr13Q6R5N8 991 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Cd274Q9EP73 290 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Celf2Q9Z0H4 508 aaKnown RBP20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Homer1Q9Z2Y3 366 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Capza3P70190 299 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Eif3j1Q3UGC7 261 aaKnown RBP20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Ddx49Q4FZF3 480 aaKnown RBP20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Tsg101Q61187 391 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Eif3j2Q66JS6 263 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Znf280dQ68FE8 974 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Secisbp2lQ6A098 1086 aaKnown RBP20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 RubcnQ80U62 956 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Slc9b1Q8C0X2 565 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Pym1Q8CHP5 203 aaKnown RBP20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 March8Q9DBD2 286 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Plagl1Q9JLQ4 704 aa20.11■□□□□ 0.81
Trim47-202ENSMUST00000106441 Abcb4P21440 1276 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Baiap3Q80TT2 1134 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 LgsnQ8CIX8 563 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Slc18a1Q8R090 521 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 TxlnbQ8VBT1 685 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Tdrd1Q99MV1 1172 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Ubxn6Q99PL6 442 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Stat2Q9WVL2 923 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Plcb1Q9Z1B3 1216 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Gm7356A0A087WSA6 508 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Nr1i3O35627 358 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 ThbdP15306 577 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Fgfr2P21803 821 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Man1a2P39098 641 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Gfpt1P47856 697 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Mcm5P49718 733 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Trim43aQ3TL54 445 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Madcam1Q61826 405 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Ms4a5Q810P8 197 aa20.1■□□□□ 0.81
Trim47-202ENSMUST00000106441 Ttc7aQ8BGB2 858 aa20.1■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms