RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Scfd1Q8BRF7 639 aaKnown RBP23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Rnf6Q9DBU5 667 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 HdxQ14B70 692 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Slc9a1Q61165 820 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Panx2Q6IMP4 677 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Cfap70D3YVL2 1141 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Hps5P59438 1126 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Mfap3lQ9D3X9 409 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Nfe2l3Q9WTM4 660 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ppp2r3dQ9Z176 491 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Myo3aQ8K3H5 1613 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Sem1P60897 70 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 RenbpP82343 430 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ccdc85aQ5SP85 500 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Atp6v0d2Q80SY3 350 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 LRWD1Q8BUI3 648 aaKnown RBP23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Slc13a1Q9JHI4 594 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Mmrn1B2RPV6 1210 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Myl1P05977 188 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ifi35Q9D8C4 286 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 MajinQ9D992 256 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Luc7l3Q5SUF2 432 aaKnown RBP23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Zfp317Q8C0Q5 607 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Med15Q924H2 789 aa23.28■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Tgs1Q923W1 853 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ap1m1P35585 423 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Dpcr1Q3TNW5 500 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Slc9a2Q3ZAS0 814 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Senp6Q6P7W0 1132 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Clec16aQ80U30 1036 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Rps6ka5Q8C050 863 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Alox15P39654 663 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Arpp19P56212 112 aaKnown RBP23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Zbtb17Q60821 794 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Trim5E9PV98 497 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Prr18Q6PAN7 307 aa23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Pabpc4Q6PHQ9 660 aaKnown RBP23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Gps1Q99LD4 471 aaKnown RBP23.27■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 SfnO70456 248 aaKnown RBP23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Hspa1lP16627 641 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Ctnnd1P30999 938 aaKnown RBP23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Cyp11b1Q3TG86 501 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Rnf112Q96DY5 654 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Cttnbp2nlQ99LJ0 638 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 CenpkQ9ESN5 271 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Arhgap42B2RQE8 841 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Cyth3O08967 399 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 G3bp2P97379 482 aaKnown RBP23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Miga1Q4QQM5 600 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Sytl1Q99N80 567 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 PdhbQ9D051 359 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Tulp1Q9Z273 543 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Znf608Q56A10 1511 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Slc3a2P10852 526 aaKnown RBP23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Cep104Q80V31 926 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Osbpl2Q8BX94 484 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Ccdc65Q8VHI7 493 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Aoc3O70423 765 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Ces1eQ64176 562 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Tmem60Q8K174 133 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Fbxo18Q8K2I9 1042 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Eif3cQ8R1B4 911 aaKnown RBP23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Acot3Q9QYR7 432 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 MtbpQ8BJS8 894 aaKnown RBP23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Morc2bQ8C5W4 1022 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Fam161bQ8CB59 589 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Taco1Q8K0Z7 294 aaKnown RBP23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Spire2Q8K1S6 718 aa23.26■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Pfkfb3A7UAK5 555 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 S100a5P63084 93 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Fam81aQ3UXZ6 364 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Gucy2fQ5SDA5 1108 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Atg16l1Q8C0J2 607 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Aco1P28271 889 aaKnown RBP23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Tbc1d19Q8VDV7 526 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Lnx1O70263 728 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Mb21d2Q8C525 428 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Phf20l1Q8CCJ9 1013 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Depdc5P61460 1591 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Simc1E9Q6E9 1354 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Sucla2Q9Z2I9 463 aa23.25■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Akap5D3YVF0 745 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 JrklB2RRL2 523 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Gimap9G3X987 291 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 AdalQ80SY6 360 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Q922C1 641 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 3830403N18RikQ9D6C3 208 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Rps6ka4Q9Z2B9 773 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Rasgrf2P70392 1189 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Snx19Q6P4T1 997 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Alpk1Q9CXB8 1231 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Cyth1Q9QX11 398 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Tcof1O08784 1320 aaKnown RBP23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Ccdc194A0A140LIT1 234 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Nova2D3YVV7 556 aaKnown RBP23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Stat4P42228 749 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Lig3P97386 1015 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 CrkQ64010 304 aa23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Brd2Q7JJ13 798 aaKnown RBP23.24■■□□□ 1.31
Smarcc1-201ENSMUST00000088716 Myoz2Q9JJW5 264 aa23.24■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms