RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Cmtm2bQ9DAC0 210 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 RabggtaQ9JHK4 567 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Lbx2Q9WUN8 195 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Topaz1E5FYH1 1653 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Il16O54824 1322 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Fmnl2A2APV2 1086 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 SmoktcrA2KF29 484 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ppfia4B8QI36 1187 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Slc28a1E9PXX9 648 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Birc3O08863 600 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 PigfO09101 219 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 P10404 641 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Usp4P35123 962 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Rangap1P46061 589 aaKnown RBP9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 FstP47931 344 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Perm1Q149B8 807 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Olfr1437Q7TQR7 312 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 ToporsQ80Z37 1033 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Gpr158Q8C419 1200 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 ClmnQ8C5W0 1052 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Rab44Q8CB87 725 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Crtac1Q8R555 646 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Abhd4Q8VD66 342 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Cabp7Q91ZM8 215 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Lman1Q9D0F3 517 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Vmn1r44Q9EQ47 310 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Aloxe3Q9WV07 711 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ybx2Q9Z2C8 360 aaKnown RBP9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 ShprhQ7TPQ3 1674 aa9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ahdc1Q6PAL7 1594 aaKnown RBP9.28□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Knl1Q66JQ7 1612 aa9.27□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ncapd2Q8K2Z4 1392 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Olfr396-ps1A0A0U1RNF5 211 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 DnttP09838 530 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 PtcraP0C6B2 199 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 CckbrP56481 453 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Arl4aP61213 200 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 St6gal2Q76K27 524 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Megf11Q80T91 1091 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Afap1Q80YS6 731 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Znf574Q8BY46 900 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 H2afy2Q8CCK0 372 aaKnown RBP9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Pih1d1Q9CQJ2 290 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Taf1dQ9D4V4 322 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Cabp1Q9JLK7 227 aa9.27□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Gm4985A2ALC6 410 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Smpd5D6MZJ6 483 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Gm45837F7D3W5 961 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Scarf2P59222 833 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Cep126Q0VBV7 1103 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Ces5aQ6AW46 575 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Wdr27Q8C5V5 780 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Vmn1r208Q8R275 308 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Ndc1Q8VCB1 673 aaKnown RBP9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Zbtb3Q91X45 518 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Pbx4Q99NE9 378 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Emc4Q9CZX9 183 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Capn15Q9JLG8 1095 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 GgcxQ9QYC7 757 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Prex1Q69ZK0 1650 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 4930407I10RikD3Z5T8 1512 aa9.26□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Ssh2Q5SW75 1423 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Frrs1lB1AXV0 293 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Taf4bG5E8Z2 855 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Bnip3O55003 187 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Eif5bQ05D44 1216 aaKnown RBP9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Nlrx1Q3TL44 975 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Q3UJP5 209 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Kif3bQ61771 747 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Zdhhc14Q8BQQ1 489 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 March2Q99M02 246 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Ly6kQ9CWP4 154 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Krtap5-3Q9D226 196 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Emc7Q9EP72 241 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Klrc3Q9QXN7 221 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 CcniQ9Z2V9 377 aa9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Spag9Q58A65 1321 aaKnown RBP9.25□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Scn4aQ9ER60 1841 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 UacaQ8CGB3 1411 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Naip5Q9R016 1403 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Gm11397F6V5V4 377 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 AampJ3QN89 436 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 ChkbO55229 394 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Zdhhc20Q5Y5T1 380 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Hapln3Q80WM5 359 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Zbtb24Q80X44 710 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Irf2bplQ8K3X4 775 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Ttc9bQ9D6E4 239 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Usp18Q9WTV6 368 aa9.24□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Adamts7Q68SA9 1657 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Rfx7F8VPJ6 1459 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Arhgap23Q69ZH9 1483 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 MeiocA2AG06 965 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Igsf23B2RTN2 239 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 RargP18911 458 aaKnown RBP9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 NrlP54846 237 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Trim43cP86449 446 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Sec23aQ01405 765 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Kcna7Q17ST2 489 aa9.23□□□□□ -0.93
Ccdc54-201ENSMUST00000062439 Aifm3Q3TY86 605 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms