RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Znfx1Q8R151 1909 aaKnown RBP10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Esyt2Q3TZZ7 845 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Rassf10Q8BL43 508 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Spata16Q8C636 571 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 CpzQ8R4V4 654 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 OscarQ8VBT3 265 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Fsip1Q9D3V5 435 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Capn9Q9D805 690 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Sept3Q9Z1S5 350 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 PfasQ5SUR0 1337 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gm45208A0A140LJ36 292 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 A0A286YCQ6 122 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gap43P06837 227 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Atp6v0a2P15920 856 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Stat4P42228 749 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Senp1P59110 640 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 SpopQ6ZWS8 374 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Smc6Q924W5 1097 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Josd2Q9CR30 188 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Fam173bQ9D1Z3 247 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 3830403N18RikQ9D6C3 208 aa10.63□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Zfyve9A2A8R0 1397 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ttc38A3KMP2 465 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gm10110D3Z5M2 615 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Bbs7Q8K2G4 715 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ddx47Q9CWX9 455 aaKnown RBP10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ankrd2Q9WV06 328 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Casz1Q9CWL2 1761 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Vmn2r79E9Q067 851 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gm6121L7MUF1 212 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 PnocQ64387 187 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Galnt17Q7TT15 598 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 CalcbQ99MP3 130 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Spata17Q9D552 379 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ttc13A0A1L1SSC7 844 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 C2cd2E9Q3C1 696 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Tagap1P0CAX8 505 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Vps41Q5KU39 853 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Fgfr1opQ66JX5 399 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Nucks1Q80XU3 234 aaKnown RBP10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Rbm41Q8JZV4 413 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Stap2Q8R0L1 411 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Dhx58Q99J87 678 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Usp11Q99K46 921 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Kremen1Q99N43 473 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 ArpinQ9D0A3 226 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Cfap57Q9D180 1249 aa10.62□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Znf609Q8BZ47 1413 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ccdc78D3Z5T1 437 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 CraddO88843 199 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Krt19P19001 403 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Agbl1Q09M05 972 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Lrrc55Q3UY51 311 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Pnma5Q5DTT8 618 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Rgl1Q60695 768 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Kiaa1328Q6NZK5 612 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ccdc87Q8CDL9 855 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 FocadA2AKG8 1798 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Myh7bA2AQP0 1941 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Vmn2r78K7N6U5 853 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Idh1O88844 414 aaKnown RBP10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Kif5cP28738 956 aaKnown RBP10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 IvlP48997 467 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gdf10P97737 476 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Arhgap44Q5SSM3 814 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Zbed4Q80WQ9 1168 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Vipas39Q8BGQ1 491 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Rint1Q8BZ36 792 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Lin9Q8C735 542 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Pym1Q8CHP5 203 aaKnown RBP10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 RnmtQ9D0L8 465 aaKnown RBP10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 AvenQ9D9K3 342 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Klc4Q9DBS5 619 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 MycbpQ9EQS3 103 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Trim10Q9WUH5 489 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gm382B1AXN3 1250 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Art2bO35975 289 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Arhgap6O54834 987 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Pcdha4O88689 947 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Nol4P60954 483 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Tatdn3Q3U1C6 294 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 SlmapQ3URD3 845 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 1810065E05RikQ5NC41 235 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ccdc92bQ5SUE3 299 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Zbtb7bQ64321 544 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Krt42Q6IFX2 452 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Ankrd24Q80VM7 985 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Zdhhc14Q8BQQ1 489 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 VillQ91YD6 859 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Coa7Q921H9 231 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Fut8Q9WTS2 575 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Nwd2Q6P5U7 1742 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Abca3Q8R420 1704 aa10.61□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Gm45261A0A1B0GSP6 197 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Mroh8E9PYI4 1049 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Guca2bO09051 106 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Lmnb2P21619 596 aaKnown RBP10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 EgfrQ01279 1210 aa10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Tnrc6cQ3UHC0 1690 aaKnown RBP10.6□□□□□ -0.71
Pcdh1-201ENSMUST00000057185 Fbxo11Q7TPD1 930 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms