RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Rbp7Q9EPC5 134 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Eif2ak1Q9Z2R9 619 aa7.65□□□□□ -1.18
Bdnf-201ENSMUST00000053317 Odf2A3KGV1 830 aaKnown RBP7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mctp1E9PV86 951 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Itgb5O70309 798 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 AcrP23578 436 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Nap1l1P28656 391 aaKnown RBP7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Nr5a1P33242 462 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Adamts10P58459 1104 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Rnpc3Q3UZ01 514 aaKnown RBP7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Crhr2Q60748 411 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Kcnk18Q6VV64 394 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Rd3Q8BRE0 195 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Lrrd1Q8C0R9 853 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Btbd7Q8CFE5 1130 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Med24Q99K74 987 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tmem192Q9CXT7 266 aa7.65□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Smim10l2aA0A0B4J1F8 78 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cdr2lA2A6T1 465 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm6133B2RY53 190 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Fam184aE9PW83 1143 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 U2af2P26369 475 aaKnown RBP7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Actr2P61161 394 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Uri1Q3TLD5 531 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Parp3Q3ULW8 533 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ces1eQ64176 562 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Asic1Q6NXK8 526 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 C6.1alQ7M757 291 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ccdc150Q8CDI7 1110 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ifih1Q8R5F7 1025 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Bloc1s4Q8VED2 215 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cabp7Q91ZM8 215 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cep72Q9D3R3 646 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 TnmdQ9EP64 317 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Zfp804bA0A0G2JGH6 1343 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tex13cD3YU32 604 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Jakmip2D3YXK0 820 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Sept4P28661 478 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Paxbp1P58501 919 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Adcy5P84309 1262 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Vgll2Q8BGW8 322 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Hexim1Q8R409 356 aaKnown RBP7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Krt79Q8VED5 531 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Zfp64Q99KE8 643 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cndp2Q9D1A2 475 aaKnown RBP7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ccdc105Q9D4K7 499 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tekt1Q9DAJ2 418 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Syt5Q9R0N5 386 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm44511A0A0N4SW10 223 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm7086A0A1W2P766 342 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm4841E9QAA8 417 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Chmp6P0C0A3 200 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Klrb1bP27812 223 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cdh15P33146 784 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 PtpreP49446 699 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gzf1Q4VBD9 706 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Fbxo44Q8BK26 255 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 NynrinQ5DTZ0 1840 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 TrdnE9Q9K5 693 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm3138K7N754 218 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tmod1P49813 359 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mgat3Q10470 538 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Znf652Q5DU09 608 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Slc45a1Q8BIV7 751 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Phldb2Q8K1N2 1249 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Traf7Q922B6 594 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tnpo2Q99LG2 887 aaKnown RBP7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Leng1Q9DB98 261 aa7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Hic2Q9JLZ6 619 aaKnown RBP7.64□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Myh6Q02566 1938 aaKnown RBP7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Wdr19Q3UGF1 1341 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm45015A0A140LII9 184 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm18336A0A140LIU8 765 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 A0A1L1SQF0 893 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 AunipE9Q6Z5 340 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm28047Q3US59 414 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Bag1Q60739 355 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tbc1d22bQ80VE5 505 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Csrnp2Q8BGQ2 534 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Slc25a38Q91XD8 326 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tex19.1Q99MV2 351 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tas1r1Q99PG6 842 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Pkp2Q9CQ73 795 aaKnown RBP7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Alpk1Q9CXB8 1231 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 MicalclQ9D5U9 680 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Alg13Q9D8C3 1166 aaKnown RBP7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Rnf123Q5XPI3 1314 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gm45194A0A140LJG2 572 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ccdc112A0AUP1 442 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Clcn3P51791 818 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 IgflQ6B9Z0 140 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tas2r124Q7M718 309 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Atp6v0d2Q80SY3 350 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Arhgef19Q8BWA8 802 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Zfp113Q8C689 439 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Rassf4Q8CB96 322 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Nrbp2Q91V36 499 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Snrnp35Q9D384 244 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Extl2Q9ES89 330 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Doc2gQ9ESN1 387 aa7.63□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms