RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Dclk2Q6PGN3 756 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 RimklbQ80WS1 387 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 6820408C15RikQ8BJX2 354 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ccdc159Q8C963 411 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Maged2Q9ER67 616 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Vmn2r78K7N6U5 853 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Cdk8Q8R3L8 464 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Prpsap1Q9D0M1 356 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Gja10Q9WUS4 505 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Clrn2B2RVW2 232 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Tph1P17532 447 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Alppl2P24823 529 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Atp8b1Q148W0 1251 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 AmphQ7TQF7 686 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Stkld1Q80YS9 662 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ankrd23Q812A3 306 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ppm1kQ8BXN7 372 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Atg16l1Q8C0J2 607 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Cbx8Q9QXV1 362 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 MypnQ5DTJ9 1315 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Tcp10bE9PYJ0 438 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Gimap9G3X987 291 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 EsrraO08580 422 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Stat4P42228 749 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Nek1P51954 1203 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Rtel1Q0VGM9 1203 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Mphosph8Q3TYA6 858 aaKnown RBP10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Sec31aQ3UPL0 1230 aaKnown RBP10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Otop3Q80UF9 577 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Clca2Q8BG22 942 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Golph3lQ8R088 285 aaKnown RBP10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Prss51A0A286YDY8 319 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Acad12D3Z7X0 555 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Stmn1P54227 149 aaKnown RBP10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cep126Q0VBV7 1103 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Srek1ip1Q4V9W2 153 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Map3k7Q62073 579 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gins2Q9D600 185 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Fam208aQ69ZR9 1610 aaKnown RBP10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 JrklB2RRL2 523 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Abcb5B5X0E4 1255 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Per2O54943 1257 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Krt10P02535 570 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Alox15P39654 663 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Arl4aP61213 200 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Pcdhb14Q6PB90 796 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 C2cd5Q7TPS5 1016 aaKnown RBP10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ppp1r16bQ8VHQ3 568 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Orc3Q9JK30 715 aaKnown RBP10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Clasp1Q80TV8 1535 aaKnown RBP10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm6370A0A0G2JGX9 315 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Apol7bB1AQP7 369 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gm6309L7N481 315 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Hspa1lP16627 641 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Mettl17Q3U2U7 461 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Hipk4Q3V016 616 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Sptlc3Q8BG54 563 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 EngaseQ8BX80 734 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Stxbp5Q8K400 1152 aaKnown RBP10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Atp5c1Q91VR2 298 aaKnown RBP10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Nek8Q91ZR4 698 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Orc1Q9Z1N2 840 aaKnown RBP10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Mmrn2A6H6E2 943 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Agap2Q3UHD9 1186 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 TwistnbQ78WZ7 330 aaKnown RBP10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Pdik1lQ8QZR7 341 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Akr1c14Q91WT7 323 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cdk5rap3Q99LM2 503 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ranbp17Q99NF8 1088 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Pcsk1nQ9QXV0 258 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 DgkkE9Q7N4 1118 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 SftpbP50405 377 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Gtpbp6Q3U6U5 514 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Zbtb41Q811F1 908 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Hpcal4Q8BGZ1 191 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Uba6Q8C7R4 1053 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ttc1Q91Z38 292 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Catsper1Q91ZR5 686 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Fam84aQ9D650 292 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Mrps9Q9D7N3 390 aaKnown RBP10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ehd4Q9EQP2 541 aa10.58□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ttc17E9PVB5 1198 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Nr5a1P33242 462 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 LbrQ3U9G9 626 aaKnown RBP10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Inpp5fQ8CDA1 1132 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Basp1Q91XV3 226 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Ccdc70Q9D9B0 223 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 EsrrgP62509 458 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Sparcl1P70663 650 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Wdr36Q3TAQ9 899 aaKnown RBP10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Snx19Q6P4T1 997 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Cd248Q91V98 765 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Med7Q9CZB6 233 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 ArpinQ9D0A3 226 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Zdhhc9P59268 364 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 MagohP61327 146 aaKnown RBP10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Trim43aQ3TL54 445 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Osbpl2Q8BX94 484 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 MagohbQ9CQL1 146 aa10.57□□□□□ -0.72
Syne1-201ENSMUST00000041639 Scg2Q03517 617 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms