RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Dnaaf1Q9D2H9 634 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 DtnaQ9D2N4 746 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Snx5Q9D8U8 404 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Trim54Q9ERP3 366 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Tmed2Q9R0Q3 201 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Krt27Q9Z320 448 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Arhgap6O54834 987 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Abcb1bP06795 1276 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 RpsaP14206 295 aaKnown RBP9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 NyxP83503 476 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ino80dQ66JY2 873 aaKnown RBP9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Zc4h2Q68FG0 224 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Bbs7Q8K2G4 715 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Tbc1d19Q8VDV7 526 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Krt5Q922U2 580 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ccdc22Q9JIG7 627 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Eddm13E9Q7F5 164 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Cyp3a25O09158 503 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Pja1O55176 578 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Hcls1P49710 486 aaKnown RBP9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Armc7Q3UJZ3 198 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Dennd2cQ6P9P8 914 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Spag7Q7TNE3 227 aaKnown RBP9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Best2Q8BGM5 508 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ppm1kQ8BXN7 372 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 CenpuQ8C4M7 410 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ap3m2Q8R2R9 418 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Rnf31Q924T7 1066 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Emilin1Q99K41 1017 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Vps33aQ9D2N9 598 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Mfap3lQ9D3X9 409 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Ndufa13Q9ERS2 144 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Bnip3lQ9Z2F7 218 aa9.84□□□□□ -0.83
Ccdc47-201ENSMUST00000002043 Prss51A0A286YDY8 319 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Serpina3iD3Z450 408 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Zfp846G3X996 541 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Snx12O70493 165 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Serpina1aP07758 413 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Serpina1bP22599 413 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Serpina1cQ00896 412 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Serpina1dQ00897 413 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Krt35Q497I4 455 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 PighQ5M9N4 188 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Zbtb41Q811F1 908 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gpcpd1Q8C0L9 675 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Fkbp6Q91XW8 327 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Polr3eQ9CZT4 710 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Slc5a4aQ9ET37 656 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tnni1Q9WUZ5 187 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 AatkQ80YE4 1365 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Krt24A1L317 512 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cdc25aP48964 514 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Mybl1P51960 751 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Lsg1Q3UM18 644 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Kctd16Q5DTY9 427 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tbc1d30Q69ZT9 766 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Dcaf5Q80T85 946 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tgs1Q923W1 853 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ndc80Q9D0F1 642 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Snrnp35Q9D384 244 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Nr2e3Q9QXZ7 395 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 NfkbiaQ9Z1E3 314 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Pprc1Q6NZN1 1644 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm2237E9Q501 211 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rap1gds1E9Q912 607 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm3591K7N6X2 186 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gm21962L7N280 338 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Edem3Q2HXL6 931 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Xxylt1Q3U4G3 392 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Eps15l1Q60902 907 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ddx3yQ62095 658 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Nme8Q715T0 586 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Ric8bQ80XE1 520 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Champ1Q8K327 802 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gga1Q8R0H9 635 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Atp5c1Q91VR2 298 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rtn3Q9ES97 964 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cyth1Q9QX11 398 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Clasp1Q80TV8 1535 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Cyp3a57D3YYZ0 503 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Soat2O88908 525 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Anxa1P10107 346 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Adssl1P28650 457 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Adcy7P51829 1099 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Gbp10Q000W5 611 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Hsdl2Q2TPA8 490 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Sult1d1Q3UZZ6 295 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Zbtb45Q52KG4 520 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Tbc1d23Q8K0F1 684 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Edc3Q8K2D3 508 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Slc8a2Q8K596 921 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 SmapQ9R0P4 181 aaKnown RBP9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Aldh18a1Q9Z110 795 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Fem1bQ9Z2G0 627 aa9.83□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Rgs12Q8CGE9 1381 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Faf1P54731 649 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Asprv1Q09PK2 339 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Trim43aQ3TL54 445 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 Naa35Q6PHQ8 725 aa9.82□□□□□ -0.84
Ccdc47-201ENSMUST00000002043 AdalQ80SY6 360 aa9.82□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms