RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W ARP1P38696 384 aa3.62□□□□□ -1.83
NUP85YJR042W STP2P38704 541 aa3.62□□□□□ -1.83
NUP85YJR042W PET100P38958 111 aa3.62□□□□□ -1.83
NUP85YJR042W RCY1P39531 840 aa3.62□□□□□ -1.83
NUP85YJR042W ROG1P53118 685 aa3.62□□□□□ -1.83
NUP85YJR042W YNL247WP53852 767 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W ESBP6P53918 673 aa3.62□□□□□ -1.83
NUP85YJR042W YMR178WQ03219 274 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W RIM13Q03792 727 aa3.62□□□□□ -1.83
NUP85YJR042W MTR10Q99189 972 aa3.62□□□□□ -1.83
NUP85YJR042W FIG2P25653 1609 aa3.62□□□□□ -1.83
NUP85YJR042W PMA1P05030 918 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W PUT2P07275 575 aa3.62□□□□□ -1.83
NUP85YJR042W RPL31BP0C2H9 113 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W MATALPHA1P0CY06 175 aa3.62□□□□□ -1.83
NUP85YJR042W HMLALPHA1P0CY07 175 aa3.62□□□□□ -1.83
NUP85YJR042W KIN2P13186 1147 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W ART10P18634 518 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W PHO13P19881 312 aa3.62□□□□□ -1.83
NUP85YJR042W BMH1P29311 267 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W SPR1P32603 445 aa3.62□□□□□ -1.83
NUP85YJR042W RPC34P32910 317 aa3.62□□□□□ -1.83
NUP85YJR042W SNU114P36048 1008 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W AGP2P38090 596 aa3.62□□□□□ -1.83
NUP85YJR042W YPT10P38146 199 aa3.62□□□□□ -1.83
NUP85YJR042W SMF2P38778 549 aa3.62□□□□□ -1.83
NUP85YJR042W YHR122WP38829 231 aa3.62□□□□□ -1.83
NUP85YJR042W HRB1P38922 454 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
NUP85YJR042W ELO1P39540 310 aa3.62□□□□□ -1.83
NUP85YJR042W RPS10BP46784 105 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W TAX4P47030 604 aa3.62□□□□□ -1.83
NUP85YJR042W EMC2P47133 292 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W YGL082WP53155 381 aa3.62□□□□□ -1.83
NUP85YJR042W RSM28Q03430 361 aa3.62□□□□□ -1.83
NUP85YJR042W COX20Q04935 205 aa3.62□□□□□ -1.83
NUP85YJR042W POS5Q06892 414 aa3.62□□□□□ -1.83
NUP85YJR042W CYK3Q07533 885 aa3.62□□□□□ -1.83
NUP85YJR042W LOT6Q07923 191 aa3.62□□□□□ -1.83
NUP85YJR042W DIS3Q08162 1001 aaKnown RBP3.62□□□□□ -1.83
NUP85YJR042W GAS5Q08193 484 aa3.62□□□□□ -1.83
NUP85YJR042W RPS10AQ08745 105 aaPredicted RBP3.62□□□□□ -1.83
NUP85YJR042W FRE5Q08908 694 aa3.62□□□□□ -1.83
NUP85YJR042W COX2P00410 251 aa3.61□□□□□ -1.83
NUP85YJR042W RIP1P08067 215 aa3.61□□□□□ -1.83
NUP85YJR042W MET16P18408 261 aaPredicted RBP3.61□□□□□ -1.83
NUP85YJR042W CNA1P23287 553 aa3.61□□□□□ -1.83
NUP85YJR042W YCP4P25349 247 aaKnown RBP3.61□□□□□ -1.83
NUP85YJR042W ADE1P27616 306 aa3.61□□□□□ -1.83
NUP85YJR042W ICL1P28240 557 aaPredicted RBP3.61□□□□□ -1.83
NUP85YJR042W CYM1P32898 989 aa3.61□□□□□ -1.83
NUP85YJR042W RRP1P35178 278 aaPredicted RBP3.61□□□□□ -1.83
NUP85YJR042W GMH1P36125 273 aa3.61□□□□□ -1.83
NUP85YJR042W ALG14P38242 237 aa3.61□□□□□ -1.83
NUP85YJR042W SPP381P38282 291 aaPredicted RBP3.61□□□□□ -1.83
NUP85YJR042W FMO1P38866 432 aa3.61□□□□□ -1.83
NUP85YJR042W PRM9P39551 298 aa3.61□□□□□ -1.83
NUP85YJR042W BUR6P40096 142 aa3.61□□□□□ -1.83
NUP85YJR042W BAP3P41815 604 aa3.61□□□□□ -1.83
NUP85YJR042W MSE1P48525 536 aa3.61□□□□□ -1.83
NUP85YJR042W MAL13P53338 473 aa3.61□□□□□ -1.83
NUP85YJR042W YNL144CP53907 740 aa3.61□□□□□ -1.83
NUP85YJR042W ERG5P54781 538 aa3.61□□□□□ -1.83
NUP85YJR042W IPK1Q06667 281 aa3.61□□□□□ -1.83
NUP85YJR042W IZH3Q07959 543 aa3.61□□□□□ -1.83
NUP85YJR042W TRM13Q12383 476 aa3.61□□□□□ -1.83
NUP85YJR042W TDH3P00359 332 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
NUP85YJR042W COX1P00401 534 aa3.6□□□□□ -1.83
NUP85YJR042W RPS16AP0CX51 143 aaKnown RBP3.6□□□□□ -1.83
NUP85YJR042W RPS16BP0CX52 143 aaKnown RBP3.6□□□□□ -1.83
NUP85YJR042W COQ1P18900 473 aa3.6□□□□□ -1.83
NUP85YJR042W VMA16P23968 213 aa3.6□□□□□ -1.83
NUP85YJR042W YPS1P32329 569 aa3.6□□□□□ -1.83
NUP85YJR042W CDC5P32562 705 aa3.6□□□□□ -1.83
NUP85YJR042W EFM2P38347 419 aa3.6□□□□□ -1.83
NUP85YJR042W DIA4P38705 446 aaPredicted RBP3.6□□□□□ -1.83
NUP85YJR042W ERG10P41338 398 aaKnown RBP3.6□□□□□ -1.83
NUP85YJR042W BNA6P43619 295 aa3.6□□□□□ -1.83
NUP85YJR042W YJL118WP47022 219 aa3.6□□□□□ -1.83
NUP85YJR042W CGR1P53188 120 aa3.6□□□□□ -1.83
NUP85YJR042W RPM2Q02773 1202 aa3.6□□□□□ -1.83
NUP85YJR042W SHR3Q02774 210 aa3.6□□□□□ -1.83
NUP85YJR042W GTO3Q04806 366 aa3.6□□□□□ -1.83
NUP85YJR042W HCR1Q05775 265 aaKnown RBP3.6□□□□□ -1.83
NUP85YJR042W SNT309Q06091 175 aaPredicted RBP3.6□□□□□ -1.83
NUP85YJR042W NRT1Q08485 598 aa3.6□□□□□ -1.83
NUP85YJR042W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
NUP85YJR042W LEA1Q08963 238 aaPredicted RBP3.6□□□□□ -1.83
NUP85YJR042W DCP1Q12517 231 aaPredicted RBP3.6□□□□□ -1.83
NUP85YJR042W AI5_ALPHAQ9ZZX1 630 aa3.6□□□□□ -1.83
NUP85YJR042W HKR1P41809 1802 aa3.6□□□□□ -1.83
NUP85YJR042W TDH2P00358 332 aaKnown RBP3.6□□□□□ -1.83
NUP85YJR042W ARG4P04076 463 aaPredicted RBP3.6□□□□□ -1.83
NUP85YJR042W SAM1P10659 382 aaKnown RBP3.6□□□□□ -1.83
NUP85YJR042W CHS2P14180 963 aa3.6□□□□□ -1.83
NUP85YJR042W HXT2P23585 541 aa3.6□□□□□ -1.83
NUP85YJR042W CNE1P27825 502 aa3.6□□□□□ -1.83
NUP85YJR042W YSC83P32792 385 aa3.6□□□□□ -1.83
NUP85YJR042W HES1P35843 434 aa3.6□□□□□ -1.83
NUP85YJR042W MMS21P38632 267 aa3.6□□□□□ -1.83
NUP85YJR042W ATM1P40416 690 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms