RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 RIPOR3Q96MK2 946 aa9.21□□□□□ -0.94
PHGDH-217ENST00000641455 TAAR1Q96RJ0 339 aa9.21□□□□□ -0.94
PHGDH-217ENST00000641455 OSBPL7Q9BZF2 842 aa9.21□□□□□ -0.94
PHGDH-217ENST00000641455 IL17RBQ9NRM6 502 aa9.21□□□□□ -0.94
PHGDH-217ENST00000641455 TOMM22Q9NS69 142 aa9.21□□□□□ -0.94
PHGDH-217ENST00000641455 DDX41Q9UJV9 622 aaKnown RBP9.21□□□□□ -0.94
PHGDH-217ENST00000641455 WDR19Q8NEZ3 1342 aa9.21□□□□□ -0.94
PHGDH-217ENST00000641455 TREHO43280 583 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 KRT37O76014 449 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 ZFYP08048 801 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-217ENST00000641455 EIF2AK2P19525 551 aaKnown RBP9.2□□□□□ -0.94
PHGDH-217ENST00000641455 CTDSPL2Q05D32 466 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 ARHGEF16Q5VV41 709 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 DGLUCYQ7Z3D6 616 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 MICAL1Q8TDZ2 1067 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 EMID1Q96A84 441 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-217ENST00000641455 SPATA33Q96N06 139 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 RMDN3Q96TC7 470 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 PLVAPQ9BX97 442 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 TLE6Q9H808 572 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 PLAGL2Q9UPG8 496 aa9.2□□□□□ -0.94
PHGDH-217ENST00000641455 CAND2O75155 1236 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 PPFIA4O75335 1185 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 GGPS1O95749 300 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 GLP2RO95838 553 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 LINC00271P0C7V0 271 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 SMIM10L2AP0DMW4 78 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 SMIM10L2BP0DMW5 78 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 TOP1P11387 765 aaKnown RBP9.19□□□□□ -0.94
PHGDH-217ENST00000641455 DNAJB1P25685 340 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 CAMK1Q14012 370 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 RRP12Q5JTH9 1297 aaKnown RBP9.19□□□□□ -0.94
PHGDH-217ENST00000641455 TMEM105Q8N8V8 129 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 KCNG4Q8TDN1 519 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 SYTL5Q8TDW5 730 aaPredicted RBP9.19□□□□□ -0.94
PHGDH-217ENST00000641455 PANK1Q8TE04 598 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 POF1BQ8WVV4 589 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 TBC1D5Q92609 795 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 CLP1Q92989 425 aaKnown RBP9.19□□□□□ -0.94
PHGDH-217ENST00000641455 IWS1Q96ST2 819 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 TMEM47Q9BQJ4 181 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 MFSD1Q9H3U5 465 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 TSHZ2Q9NRE2 1034 aa9.19□□□□□ -0.94
PHGDH-217ENST00000641455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.19□□□□□ -0.94
PHGDH-217ENST00000641455 MRPL42Q9Y6G3 142 aaKnown RBP9.19□□□□□ -0.94
PHGDH-217ENST00000641455 SMARCA5O60264 1052 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-217ENST00000641455 PPFIA3O75145 1194 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 EIF3JO75822 258 aaKnown RBP9.18□□□□□ -0.94
PHGDH-217ENST00000641455 ITGB1P05556 798 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 GHRP10912 638 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 GNAT1P11488 350 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 MYCLP12524 364 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-217ENST00000641455 ATF7P17544 494 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-217ENST00000641455 IBSPP21815 317 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-217ENST00000641455 HSDL1Q3SXM5 330 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 PAN2Q504Q3 1202 aaKnown RBP9.18□□□□□ -0.94
PHGDH-217ENST00000641455 CCDC171Q6TFL3 1326 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 KLHL23Q8NBE8 558 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 KREMEN2Q8NCW0 462 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 RGS22Q8NE09 1264 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 SPPL3Q8TCT6 385 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 P2RX5Q93086 422 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 GPATCH3Q96I76 525 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 NEK1Q96PY6 1258 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 SEC62Q99442 399 aaKnown RBP9.18□□□□□ -0.94
PHGDH-217ENST00000641455 APOL5Q9BWW9 433 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 LRRCC1Q9C099 1032 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 MLXIPQ9HAP2 919 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 ECHDC1Q9NTX5 307 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 COL20A1Q9P218 1284 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 PCDHGC5Q9Y5F6 944 aa9.18□□□□□ -0.94
PHGDH-217ENST00000641455 GVINP1Q7Z2Y8 2422 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 KIAA1671Q9BY89 1806 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 ABCB11O95342 1321 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 H3BRB1 525 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 NOP56O00567 594 aaKnown RBP9.17□□□□□ -0.94
PHGDH-217ENST00000641455 PER2O15055 1255 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 DHX16O60231 1041 aaKnown RBP9.17□□□□□ -0.94
PHGDH-217ENST00000641455 NR3C2P08235 984 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 GOLGA8HP0CJ92 632 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 SRGAP2BP0DMP2 458 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 PDHBP11177 359 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 RBM10P98175 930 aaKnown RBP9.17□□□□□ -0.94
PHGDH-217ENST00000641455 ZNF543Q08ER8 600 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 MTMR3Q13615 1198 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 CDC37Q16543 378 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-217ENST00000641455 CELF3Q5SZQ8 465 aaKnown RBP9.17□□□□□ -0.94
PHGDH-217ENST00000641455 MYSM1Q5VVJ2 828 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 TSHZ3Q63HK5 1081 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 MCF2L2Q86YR7 1114 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 RMDN1Q96DB5 314 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 C16orf70Q9BSU1 422 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 CPVLQ9H3G5 476 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 RNPEPQ9H4A4 650 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 TUT1Q9H6E5 874 aaKnown RBP9.17□□□□□ -0.94
PHGDH-217ENST00000641455 RC3H2Q9HBD1 1191 aaKnown RBP9.17□□□□□ -0.94
PHGDH-217ENST00000641455 SETD4Q9NVD3 440 aa9.17□□□□□ -0.94
PHGDH-217ENST00000641455 CACNA1GO43497 2377 aa9.16□□□□□ -0.94
PHGDH-217ENST00000641455 CFBP00751 764 aa9.16□□□□□ -0.94
PHGDH-217ENST00000641455 LGALS2P05162 132 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms