RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 RNPEPQ9H4A4 650 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 ZBTB40Q9NUA8 1239 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-212ENST00000641247 PLAGL2Q9UPG8 496 aa11.4□□□□□ -0.58
PHGDH-212ENST00000641247 PPFIA4O75335 1185 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 TRIOO75962 3097 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 MMP1P03956 469 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 FGRP09769 529 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 GOLGA8HP0CJ92 632 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 NDUFV1P49821 464 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 COASYQ13057 564 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 LAMC2Q13753 1193 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 STXBP2Q15833 593 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 VPS53Q5VIR6 699 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 RBM23Q86U06 439 aaKnown RBP11.39□□□□□ -0.59
PHGDH-212ENST00000641247 SPPL3Q8TCT6 385 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 GPKOWQ92917 476 aaPredicted RBP eCLIP11.39□□□□□ -0.59
PHGDH-212ENST00000641247 ATP6V0A1Q93050 837 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 MPHOSPH6Q99547 160 aaKnown RBP11.39□□□□□ -0.59
PHGDH-212ENST00000641247 KATNAL1Q9BW62 490 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 UBA5Q9GZZ9 404 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 USP15Q9Y4E8 981 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-212ENST00000641247 TELO2Q9Y4R8 837 aa11.39□□□□□ -0.59
PHGDH-212ENST00000641247 WDR19Q8NEZ3 1342 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 KMT2EQ8IZD2 1858 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 C17orf102A2RUQ5 167 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 ENPP3O14638 875 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 HMMRO75330 724 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 ITGB1P05556 798 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 SLC3A2P08195 630 aaKnown RBP11.38□□□□□ -0.59
PHGDH-212ENST00000641247 SNHG28P0DPA3 235 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 TOP1P11387 765 aaKnown RBP11.38□□□□□ -0.59
PHGDH-212ENST00000641247 EIF2AK2P19525 551 aaKnown RBP11.38□□□□□ -0.59
PHGDH-212ENST00000641247 NBL1P41271 181 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 ID4P47928 161 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 ZNF543Q08ER8 600 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 B4GALNT3Q6L9W6 998 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 ERMP1Q7Z2K6 904 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 TMEM105Q8N8V8 129 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 VN1R2Q8NFZ6 395 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 NSUN6Q8TEA1 469 aaKnown RBP11.38□□□□□ -0.59
PHGDH-212ENST00000641247 CCDC136Q96JN2 1154 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 RIPOR3Q96MK2 946 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 RMDN3Q96TC7 470 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 C11orf84Q9BUA3 381 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-212ENST00000641247 PHF7Q9BWX1 381 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-212ENST00000641247 NACAP1Q9BZK3 213 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 LRRCC1Q9C099 1032 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 MRVI1Q9Y6F6 885 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 CACNA1AO00555 2505 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 ZDBF2Q9HCK1 2354 aa11.38□□□□□ -0.59
PHGDH-212ENST00000641247 MED19A0JLT2 244 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-212ENST00000641247 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-212ENST00000641247 EIF3JO75822 258 aaKnown RBP11.37□□□□□ -0.59
PHGDH-212ENST00000641247 KRT37O76014 449 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 CHRNA1P02708 482 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 NR3C2P08235 984 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 SMIM10L2AP0DMW4 78 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 SMIM10L2BP0DMW5 78 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 ICAM3P32942 547 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 NRIP1P48552 1158 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 ZMYM1Q5SVZ6 1142 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 CELF3Q5SZQ8 465 aaKnown RBP11.37□□□□□ -0.59
PHGDH-212ENST00000641247 EFHBQ8N7U6 833 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 SUSD6Q92537 303 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 SPATA33Q96N06 139 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 SMOC2Q9H3U7 446 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 DDX19BQ9UMR2 479 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 MRPL42Q9Y6G3 142 aaKnown RBP11.37□□□□□ -0.59
PHGDH-212ENST00000641247 ATG2AQ2TAZ0 1938 aa11.37□□□□□ -0.59
PHGDH-212ENST00000641247 ADGRA3Q8IWK6 1321 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 B4DLN1 442 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 OPLAHO14841 1288 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 PER2O15055 1255 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 ORC4O43929 436 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 ZFYP08048 801 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-212ENST00000641247 MRPL12P52815 198 aaKnown RBP11.36□□□□□ -0.59
PHGDH-212ENST00000641247 PTPN21Q16825 1174 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 FAM26DQ5JW98 314 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 PPP4R3BQ5MIZ7 849 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 FRMD5Q7Z6J6 570 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 RTN4RL1Q86UN2 441 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-212ENST00000641247 CRIPAKQ8N1N5 446 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 KLHL23Q8NBE8 558 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 LINC01599Q8WXQ3 324 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 IWS1Q96ST2 819 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 TCP11L1Q9NUJ3 509 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 CDH22Q9UJ99 828 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 ANAPC4Q9UJX5 808 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 MICAL3Q7RTP6 2002 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 DCHS1Q96JQ0 3298 aa11.36□□□□□ -0.59
PHGDH-212ENST00000641247 CACNA1HO95180 2353 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 PTPRZ1P23471 2315 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-212ENST00000641247 H3BRB1 525 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 KDM4AO75164 1064 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 DGKIO75912 1065 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 GGPS1O95749 300 aa11.35□□□□□ -0.59
PHGDH-212ENST00000641247 GHRP10912 638 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms