RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CCDC65Q8IXS2 484 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 GUF1Q8N442 669 aaKnown RBP19.26■□□□□ 0.67
PHGDH-208ENST00000641023 CSGALNACT2Q8N6G5 542 aa19.26■□□□□ 0.67
PHGDH-208ENST00000641023 SRRTQ9BXP5 876 aaKnown RBP19.26■□□□□ 0.67
PHGDH-208ENST00000641023 ADM5C9JUS6 153 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 IPO5O00410 1097 aaKnown RBP19.25■□□□□ 0.67
PHGDH-208ENST00000641023 N4BP3O15049 544 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 KRT18P05783 430 aaKnown RBP19.25■□□□□ 0.67
PHGDH-208ENST00000641023 ARP10275 920 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 CYP11B2P19099 503 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 IREB2P48200 963 aaKnown RBP19.25■□□□□ 0.67
PHGDH-208ENST00000641023 SLC12A3P55017 1021 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 NIPA1Q7RTP0 329 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 SYT2Q8N9I0 419 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-208ENST00000641023 HPS3Q969F9 1004 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 L3MBTL3Q96JM7 780 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-208ENST00000641023 RIT2Q99578 217 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 TUFT1Q9NNX1 390 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 MAGEC2Q9UBF1 373 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-208ENST00000641023 SNCAIPQ9Y6H5 919 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 MYPNQ86TC9 1320 aa19.25■□□□□ 0.67
PHGDH-208ENST00000641023 EML1O00423 815 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 CYP4A11Q02928 519 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 SNRNP48Q6IEG0 339 aaKnown RBP19.24■□□□□ 0.67
PHGDH-208ENST00000641023 CENPPQ6IPU0 288 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 CCDC112Q8NEF3 446 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 REPS2Q8NFH8 660 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 ZC3H15Q8WU90 426 aaKnown RBP19.24■□□□□ 0.67
PHGDH-208ENST00000641023 WNK4Q96J92 1243 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 HSD17B14Q9BPX1 270 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 TEKT3Q9BXF9 490 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 RNF146Q9NTX7 359 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 ATP2A1O14983 1001 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 TEX33O43247 280 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 ITGB5P18084 799 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 MUTP22033 750 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 NF2P35240 595 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 COASYQ13057 564 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 TBX2Q13207 712 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-208ENST00000641023 PTPN21Q16825 1174 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 ANKRD40Q6AI12 368 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 NSMFQ6X4W1 530 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 FAM114A1Q8IWE2 563 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 ZFP91Q96JP5 570 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-208ENST00000641023 KCNH7Q9NS40 1196 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 PHIPQ8WWQ0 1821 aa19.24■□□□□ 0.67
PHGDH-208ENST00000641023 CHMP2AO43633 222 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 COPB1P53618 953 aaKnown RBP19.23■□□□□ 0.67
PHGDH-208ENST00000641023 PSMC6P62333 389 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 PABPC4Q13310 644 aaKnown RBP eCLIP19.23■□□□□ 0.679e-7■■■■□ 21.6
PHGDH-208ENST00000641023 DLK2Q6UY11 383 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 IRF2BP1Q8IU81 584 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 TAAR1Q96RJ0 339 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 RMDN3Q96TC7 470 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 RGL1Q9NZL6 768 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 ZNF214Q9UL59 606 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-208ENST00000641023 RIPK3Q9Y572 518 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 FRMPD4Q14CM0 1322 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 SLITRK3O94933 977 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 FAM26FQ5R3K3 315 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 DUSP9Q99956 384 aaKnown RBP19.23■□□□□ 0.67
PHGDH-208ENST00000641023 TEX13BQ9BXU2 312 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 VPS16Q9H269 839 aa19.23■□□□□ 0.67
PHGDH-208ENST00000641023 KIF20AO95235 890 aa19.22■□□□□ 0.67
PHGDH-208ENST00000641023 EIF2AK2P19525 551 aaKnown RBP19.22■□□□□ 0.67
PHGDH-208ENST00000641023 EPHX2P34913 555 aa19.22■□□□□ 0.67
PHGDH-208ENST00000641023 PBX1P40424 430 aa19.22■□□□□ 0.67
PHGDH-208ENST00000641023 PGM5Q15124 567 aa19.22■□□□□ 0.67
PHGDH-208ENST00000641023 HERC4Q5GLZ8 1057 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-208ENST00000641023 ARHGEF16Q5VV41 709 aa19.22■□□□□ 0.67
PHGDH-208ENST00000641023 SLC30A10Q6XR72 485 aa19.22■□□□□ 0.67
PHGDH-208ENST00000641023 TPH2Q8IWU9 490 aa19.22■□□□□ 0.67
PHGDH-208ENST00000641023 JADE2Q9NQC1 790 aa19.22■□□□□ 0.67
PHGDH-208ENST00000641023 TAB2Q9NYJ8 693 aa19.22■□□□□ 0.67
PHGDH-208ENST00000641023 UBIAD1Q9Y5Z9 338 aa19.22■□□□□ 0.67
PHGDH-208ENST00000641023 PARP14Q460N5 1801 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 EYA4O95677 639 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 FGFR1OPO95684 399 aaKnown RBP19.21■□□□□ 0.67
PHGDH-208ENST00000641023 LRRC63Q05C16 580 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 MTMR1Q13613 665 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 TMEM132BQ14DG7 1078 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 EPHA7Q15375 998 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 TKFCQ3LXA3 575 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 ARSHQ5FYA8 562 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 MYOCDQ8IZQ8 938 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 IL31RAQ8NI17 732 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 BHMT2Q9H2M3 363 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 SEMA6BQ9H3T3 888 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-208ENST00000641023 ITIH6Q6UXX5 1313 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 FRMD3A2A2Y4 597 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 TPM2P07951 284 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 MRPS9P82933 396 aaKnown RBP19.21■□□□□ 0.67
PHGDH-208ENST00000641023 BAATQ14032 418 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-208ENST00000641023 CTTNQ14247 550 aaKnown RBP19.21■□□□□ 0.67
PHGDH-208ENST00000641023 FOXR2Q6PJQ5 311 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 B3GNT9Q6UX72 402 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 PPFIBP1Q86W92 1011 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 DYDC2Q96IM9 177 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 PDCD2LQ9BRP1 358 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms