RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 LDHAP00338 332 aaKnown RBP8.54□□□□□ -1.04
SCARB2-224ENST00000640880 GRK2P25098 689 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 GRK3P35626 688 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 GMPRP36959 345 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 IREB2P48200 963 aaKnown RBP8.54□□□□□ -1.04
SCARB2-224ENST00000640880 INF2Q27J81 1249 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 TSHZ1Q6ZSZ6 1077 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 C22orf34Q6ZV56 151 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 FAM214BQ7L5A3 538 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 PNMA8AQ86V59 439 aaPredicted RBP8.54□□□□□ -1.04
SCARB2-224ENST00000640880 MFSD4AQ8N468 514 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 C1orf162Q8NEQ5 155 aaPredicted RBP8.54□□□□□ -1.04
SCARB2-224ENST00000640880 WFDC12Q8WWY7 111 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 MMP19Q99542 508 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 GPR62Q9BZJ7 368 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 KCNF1Q9H3M0 494 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 TCF7L1Q9HCS4 588 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 CATSPERZQ9NTU4 200 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 NOP53Q9NZM5 478 aaKnown RBP8.54□□□□□ -1.04
SCARB2-224ENST00000640880 GTF2IRD1Q9UHL9 959 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 ANKRD6Q9Y2G4 727 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 CAPN6Q9Y6Q1 641 aa8.54□□□□□ -1.04
SCARB2-224ENST00000640880 CROCC2H7BZ55 1655 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 ADGBQ8N7X0 1667 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 CREB3O43889 395 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 ZNF205O95201 554 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 SYPP08247 313 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 ZNF865P0CJ78 1059 aaPredicted RBP8.53□□□□□ -1.04
SCARB2-224ENST00000640880 TSPY4P0CV99 314 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 TSPY10P0CW01 314 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 RECQLP46063 649 aaPredicted RBP8.53□□□□□ -1.04
SCARB2-224ENST00000640880 RTP2Q5QGT7 225 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 ERICH6BQ5W0A0 696 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 CREB3L3Q68CJ9 461 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 MBLAC2Q68D91 279 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 PGM2L1Q6PCE3 622 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 C16orf59Q7L2K0 433 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 FAM20CQ8IXL6 584 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 CPA6Q8N4T0 437 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 EFHBQ8N7U6 833 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 FAXDC2Q96IV6 333 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 HEXIM2Q96MH2 286 aaKnown RBP8.53□□□□□ -1.04
SCARB2-224ENST00000640880 ZNF700Q9H0M5 742 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 PNMA8BQ9ULN7 279 aaPredicted RBP8.53□□□□□ -1.04
SCARB2-224ENST00000640880 CBLCQ9ULV8 474 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 GIT1Q9Y2X7 761 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 ATP7AQ04656 1500 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 FGD6Q6ZV73 1430 aa8.53□□□□□ -1.04
SCARB2-224ENST00000640880 MYO1BO43795 1136 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 KRT37O76014 449 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 YBX3P16989 372 aaKnown RBP eCLIP8.52□□□□□ -1.05
SCARB2-224ENST00000640880 HNRNPMP52272 730 aaKnown RBP eCLIP8.52□□□□□ -1.05
SCARB2-224ENST00000640880 SAFB2Q14151 953 aaKnown RBP eCLIP8.52□□□□□ -1.05
SCARB2-224ENST00000640880 ARHGAP44Q17R89 818 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 MINDY4Q4G0A6 757 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 TMEM240Q5SV17 173 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 BROXQ5VW32 411 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 ARMC10Q8N2F6 343 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 PANK1Q8TE04 598 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 CHAMP1Q96JM3 812 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 PRDM11Q9NQV5 511 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 ZBTB21Q9ULJ3 1066 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 KIDINS220Q9ULH0 1771 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 TRAPPC8Q9Y2L5 1435 aa8.52□□□□□ -1.05
SCARB2-224ENST00000640880 INO80Q9ULG1 1556 aaPredicted RBP8.52□□□□□ -1.05
SCARB2-224ENST00000640880 SPAG9O60271 1321 aaKnown RBP8.52□□□□□ -1.05
SCARB2-224ENST00000640880 MLH3Q9UHC1 1453 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 DNMT1P26358 1616 aaKnown RBP8.51□□□□□ -1.05
SCARB2-224ENST00000640880 ABCA6Q8N139 1617 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 ARHGEF12Q9NZN5 1544 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 TRBV23OR9-2A0A075B6M9 112 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 TGM5O43548 720 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 CFBP00751 764 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 SPATA31C1P0DKV0 1188 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 RBP3P10745 1247 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 SRFP11831 508 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 PCBP3P57721 371 aaKnown RBP8.51□□□□□ -1.05
SCARB2-224ENST00000640880 NRG1Q02297 640 aaPredicted RBP8.51□□□□□ -1.05
SCARB2-224ENST00000640880 CRY1Q16526 586 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 CPNE8Q86YQ8 564 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 SVIPQ8NHG7 77 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 USP33Q8TEY7 942 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 TIFAQ96CG3 184 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 CLIP3Q96DZ5 547 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 DUSP15Q9H1R2 295 aaPredicted RBP8.51□□□□□ -1.05
SCARB2-224ENST00000640880 MKS1Q9NXB0 559 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 FBXL7Q9UJT9 491 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 C9orf84Q5VXU9 1444 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 DIP2CQ9Y2E4 1556 aa8.51□□□□□ -1.05
SCARB2-224ENST00000640880 SSU72P8A0A1W2PR75 194 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 FAM155AB1AL88 458 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-224ENST00000640880 C9orf172C9J069 976 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 H7C1D1 291 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 IGF2BP3O00425 579 aaKnown RBP eCLIP8.5□□□□□ -1.05
SCARB2-224ENST00000640880 TPP2P29144 1249 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-224ENST00000640880 CYP2C19P33261 490 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 PURAQ00577 322 aaKnown RBP8.5□□□□□ -1.05
SCARB2-224ENST00000640880 INSM1Q01101 510 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-224ENST00000640880 LAPTM5Q13571 262 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms