RNA–Protein interactions for RNA: ENST00000640752.1

HADH-223, Transcript of hydroxyacyl-CoA dehydrogenase, human

TSL 5

Gene HADH, Length 5,948 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HADH-223	ENST00000640752	DHX38	Q92620	1227 aa	Known RBP	13.19	□□□□□ -0.3
HADH-223	ENST00000640752	CNOT6L	Q96LI5	555 aa	Known RBP	13.19	□□□□□ -0.3
HADH-223	ENST00000640752	ZBED2	Q9BTP6	218 aa		13.19	□□□□□ -0.3
HADH-223	ENST00000640752	BRIP1	Q9BX63	1249 aa		13.19	□□□□□ -0.3
HADH-223	ENST00000640752	MTIF3	Q9H2K0	278 aa	Known RBP	13.19	□□□□□ -0.3
HADH-223	ENST00000640752	PARVG	Q9HBI0	331 aa		13.19	□□□□□ -0.3
HADH-223	ENST00000640752	CARMIL3	Q8ND23	1372 aa		13.19	□□□□□ -0.3
HADH-223	ENST00000640752	MAP3K4	Q9Y6R4	1608 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	GPC4	O75487	556 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	INPP5B	P32019	993 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	FAM149B1	Q96BN6	582 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	DYNLL2	Q96FJ2	89 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	NARF	Q9UHQ1	456 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	SHROOM2	Q13796	1616 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	SH2B2	O14492	632 aa	Predicted RBP	13.18	□□□□□ -0.3
HADH-223	ENST00000640752	MGEA5	O60502	916 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	TTC4	O95801	387 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	NDUFA8	P51970	172 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	COG7	P83436	770 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	PTPN12	Q05209	780 aa	Known RBP	13.18	□□□□□ -0.3
HADH-223	ENST00000640752	PSMD6	Q15008	389 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	SLC39A14	Q15043	492 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	JADE1	Q6IE81	842 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	PDXDC2P	Q6P474	469 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	DGKH	Q86XP1	1220 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	MCPH1	Q8NEM0	835 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	INHBA	P08476	426 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	GTF2A1	P52655	376 aa	Predicted RBP	13.18	□□□□□ -0.3
HADH-223	ENST00000640752	MFSD14C	Q5VZR4	134 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	DSTYK	Q6XUX3	929 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	CNPY4	Q8N129	248 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	PI4K2B	Q8TCG2	481 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	PARD3B	Q8TEW8	1205 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	PGBD1	Q96JS3	809 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	CDK8	P49336	464 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	DNAJC24	Q6P3W2	148 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	TTLL11	Q8NHH1	800 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	P2RX5	Q93086	422 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	MRFAP1L1	Q96HT8	127 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	TRIM62	Q9BVG3	475 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	POLR3E	Q9NVU0	708 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	U2AF2	P26368	475 aa	Known RBP eCLIP	13.18	□□□□□ -0.3	1e-6	■□□□□ 10.6
HADH-223	ENST00000640752	COPB1	P53618	953 aa	Known RBP	13.18	□□□□□ -0.3
HADH-223	ENST00000640752	THOC5	Q13769	683 aa	Known RBP	13.18	□□□□□ -0.3
HADH-223	ENST00000640752	RASGRF1	Q13972	1273 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.18	□□□□□ -0.3
HADH-223	ENST00000640752	MIPOL1	Q8TD10	442 aa		13.18	□□□□□ -0.3
HADH-223	ENST00000640752	PUS7L	Q9H0K6	701 aa	Known RBP	13.18	□□□□□ -0.3
HADH-223	ENST00000640752	STXBP2	Q15833	593 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	USP17L2	Q6R6M4	530 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	EEPD1	Q7L9B9	569 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	EVI5	O60447	810 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	MAPK4	P31152	587 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	MTERF2	Q49AM1	385 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.17	□□□□□ -0.3
HADH-223	ENST00000640752	NXN	Q6DKJ4	435 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	RNF10	Q8N5U6	811 aa	Known RBP	13.17	□□□□□ -0.3
HADH-223	ENST00000640752	MTA3	Q9BTC8	594 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	ABCB11	O95342	1321 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	SPATA31E1	Q6ZUB1	1445 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	BUB1	O43683	1085 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	PI16	Q6UXB8	463 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	RNF207	Q6ZRF8	634 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	PSPC1	Q8WXF1	523 aa	Known RBP	13.17	□□□□□ -0.3
HADH-223	ENST00000640752	C2orf40	Q9H1Z8	148 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	SCIN	Q9Y6U3	715 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	TARBP1	Q13395	1621 aa	Known RBP	13.17	□□□□□ -0.3
HADH-223	ENST00000640752	STMN1	P16949	149 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	PHKA2	P46019	1235 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	PPP2R3C	Q969Q6	453 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
HADH-223	ENST00000640752	TBC1D22B	Q9NU19	505 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	LIFR	P42702	1097 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	PDE1B	Q01064	536 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.17	□□□□□ -0.3
HADH-223	ENST00000640752	FANCL	Q9NW38	375 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	MAD1L1	Q9Y6D9	718 aa		13.17	□□□□□ -0.3
HADH-223	ENST00000640752	RECQL	P46063	649 aa	Predicted RBP	13.16	□□□□□ -0.3
HADH-223	ENST00000640752	CCDC38	Q502W7	563 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	PPP1R12C	Q9BZL4	782 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	PIH1D3	Q9NQM4	214 aa	Known RBP	13.16	□□□□□ -0.3
HADH-223	ENST00000640752	USP17L5	A8MUK1	530 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752		H7C1W4	665 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	MAP3K7	O43318	606 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	CRK	P46108	304 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	RNF219	Q5W0B1	726 aa	Predicted RBP	13.16	□□□□□ -0.3
HADH-223	ENST00000640752	ARHGEF18	Q6ZSZ5	1173 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.16	□□□□□ -0.3
HADH-223	ENST00000640752	OSBP2	Q969R2	916 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	MXD3	Q9BW11	206 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	ARHGAP31	Q2M1Z3	1444 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	TTC36	A6NLP5	189 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	CP	P00450	1065 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	MMP1	P03956	469 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	RCAN1	P53805	252 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	YWHAG	P61981	247 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
HADH-223	ENST00000640752	TFAM	Q00059	246 aa	Known RBP	13.16	□□□□□ -0.3
HADH-223	ENST00000640752	ADCK5	Q3MIX3	580 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	KCNV1	Q6PIU1	500 aa		13.16	□□□□□ -0.3
HADH-223	ENST00000640752	NUDT18	Q6ZVK8	323 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms