RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 POTEB3A0JP26 581 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 TRIM49BA6NDI0 452 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 POTECB2RU33 542 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 FAM86B1E9PN63 330 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 TEX33O43247 280 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 KIF5CO60282 957 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 FAM86B2P0C5J1 330 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 KRT9P35527 623 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 CYLC1P35663 651 aaPredicted RBP9.22□□□□□ -0.93
PNKP-231ENST00000640501 SNAP25P60880 206 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 KRT83P78385 493 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 EDRF1Q3B7T1 1238 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 TKFCQ3LXA3 575 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 CCDC40Q4G0X9 1142 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 TBC1D10BQ4KMP7 808 aaPredicted RBP9.22□□□□□ -0.93
PNKP-231ENST00000640501 ARHGAP29Q52LW3 1261 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 ANKRD40Q6AI12 368 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 POTEBQ6S5H4 581 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 CATSPER3Q86XQ3 398 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 KIAA0895Q8NCT3 520 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 ZNF280CQ8ND82 737 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 EHBP1Q8NDI1 1231 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 RBM46Q8TBY0 533 aaKnown RBP9.22□□□□□ -0.93
PNKP-231ENST00000640501 CPLX3Q8WVH0 158 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 TEPSINQ96N21 525 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 EIF2AK1Q9BQI3 630 aaKnown RBP9.22□□□□□ -0.93
PNKP-231ENST00000640501 MXRA8Q9BRK3 442 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 EDEM3Q9BZQ6 932 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 SLC38A10Q9HBR0 1119 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 LUC7LQ9NQ29 371 aaKnown RBP9.22□□□□□ -0.93
PNKP-231ENST00000640501 TBC1D22BQ9NU19 505 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 ABHD10Q9NUJ1 306 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 MYO1AQ9UBC5 1043 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 PPP1R9AQ9ULJ8 1098 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 CAPN11Q9UMQ6 739 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 UBE4BO95155 1302 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 MYPNQ86TC9 1320 aa9.22□□□□□ -0.93
PNKP-231ENST00000640501 IGLV3-22A0A075B6J6 115 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 E9PMD0 336 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 IPO5O00410 1097 aaKnown RBP9.21□□□□□ -0.94
PNKP-231ENST00000640501 TRAF5O00463 557 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 MEIS1O00470 390 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 RIOK3O14730 519 aaKnown RBP9.21□□□□□ -0.94
PNKP-231ENST00000640501 CETN3O15182 167 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 MAFGO15525 162 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 EDIL3O43854 480 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 MED24O75448 989 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 FAM13AO94988 1023 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 GYPCP04921 128 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 FCER1AP12319 257 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 CYP11B2P19099 503 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 FECHP22830 423 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 CASQ1P31415 396 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 SLC12A3P55017 1021 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 BACE1P56817 501 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 ZBED6P86452 979 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 EHHADHQ08426 723 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 SPIRE1Q08AE8 756 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 ALCAMQ13740 583 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 EPHA7Q15375 998 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 VWA3BQ502W6 1294 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 PCNX4Q63HM2 1172 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 SAMD1Q6SPF0 538 aaPredicted RBP9.21□□□□□ -0.94
PNKP-231ENST00000640501 FMNL3Q8IVF7 1028 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 CCDC170Q8IYT3 715 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 SLC17A8Q8NDX2 589 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 GOLGA5Q8TBA6 731 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 LENG9Q96B70 501 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 DNAJC19Q96DA6 116 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 CDHR1Q96JP9 859 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 C12orf42Q96LP6 360 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 ERGIC2Q96RQ1 377 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 DUSP9Q99956 384 aaKnown RBP9.21□□□□□ -0.94
PNKP-231ENST00000640501 TIPINQ9BVW5 301 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 NDST4Q9H3R1 872 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 ZHX3Q9H4I2 956 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 METTL14Q9HCE5 456 aaKnown RBP9.21□□□□□ -0.94
PNKP-231ENST00000640501 OLFML3Q9NRN5 406 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 EMILIN3Q9NT22 766 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 ZNF112Q9UJU3 913 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 VAV3Q9UKW4 847 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 ODF2LQ9ULJ1 636 aa9.21□□□□□ -0.94
PNKP-231ENST00000640501 FRMD3A2A2Y4 597 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 POTEFA5A3E0 1075 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 B4DLN1 442 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 PDXKO00764 312 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 OPLAHO14841 1288 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 EIF3DO15371 548 aaKnown RBP eCLIP9.2□□□□□ -0.94
PNKP-231ENST00000640501 PSMD10O75832 226 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 STAM2O75886 525 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 SLU7O95391 586 aaKnown RBP9.2□□□□□ -0.94
PNKP-231ENST00000640501 POTEIP0CG38 1075 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 ALAS1P13196 640 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 VCAM1P19320 739 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 SFNP31947 248 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 ABCD1P33897 745 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 JAK3P52333 1124 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 RASSF7Q02833 373 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 MTMR2Q13614 643 aa9.2□□□□□ -0.94
PNKP-231ENST00000640501 ANGEL2Q5VTE6 544 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms