RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 CLIP2Q9UDT6 1046 aa10.88□□□□□ -0.67
MCF2L2-214ENST00000640043 PRR12Q9ULL5 1215 aa10.88□□□□□ -0.67
MCF2L2-214ENST00000640043 TRIP12Q14669 1992 aaPredicted RBP10.88□□□□□ -0.67
MCF2L2-214ENST00000640043 RAD50Q92878 1312 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 WDFY4Q6ZS81 3184 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 SOWAHBA6NEL2 793 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 NKRFO15226 690 aaKnown RBP eCLIP10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 GNAT2P19087 354 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 CNTN2Q02246 1040 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 PSMD2Q13200 908 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 PUS10Q3MIT2 529 aaKnown RBP10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 TAPT1Q6NXT6 567 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 MCF2L2Q86YR7 1114 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 ZNF654Q8IZM8 581 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 ZNF444Q8N0Y2 327 aaPredicted RBP10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 CCDC155Q8N6L0 562 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 SCLYQ96I15 445 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 PRIMPOLQ96LW4 560 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 HOMER2Q9NSB8 354 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 PNMA2Q9UL42 364 aa10.87□□□□□ -0.67
MCF2L2-214ENST00000640043 CACNA1HO95180 2353 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 ZDBF2Q9HCK1 2354 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 CFAP99D6REC4 459 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 SMIM22K7EJ46 135 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 K7ELQ4 463 aaPredicted RBP10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 EFCAB14O75071 495 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 FBXO45P0C2W1 286 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 SLC4A3P48751 1232 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 PURAQ00577 322 aaKnown RBP10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 GRB10Q13322 594 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 TRIM50Q86XT4 487 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 ARNTL2Q8WYA1 636 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 TRERF1Q96PN7 1200 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 STRBPQ96SI9 672 aaKnown RBP10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 MPHOSPH6Q99547 160 aaKnown RBP10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 MTG1Q9BT17 334 aaPredicted RBP10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 CYP39A1Q9NYL5 469 aa10.86□□□□□ -0.67
MCF2L2-214ENST00000640043 ZNF536O15090 1300 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 EPOPA6NHQ4 379 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 GSG1L2A8MUP6 293 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 TMEM232C9JQI7 657 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 CCER2I3L3R5 266 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 ZFYP08048 801 aaPredicted RBP10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 PDGFRBP09619 1106 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 IQCF3P0C7M6 154 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 KCNJ6P48051 423 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 ATP1A2P50993 1020 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 PSMC6P62333 389 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 LEXMQ3ZCV2 418 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 SLFN13Q68D06 897 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 DEFB128Q7Z7B8 93 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 NEDD1Q8NHV4 660 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 CAGE1Q8TC20 777 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 CEP95Q96GE4 821 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 PUS7LQ9H0K6 701 aaKnown RBP10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 BOLA2Q9H3K6 86 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 CHMP4BQ9H444 224 aaKnown RBP10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 TRMT13Q9NUP7 481 aaKnown RBP10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 BOLA1Q9Y3E2 137 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 LCTP09848 1927 aa10.85□□□□□ -0.67
MCF2L2-214ENST00000640043 SIP14410 1827 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 B4DLN1 442 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 LPXNO60711 386 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 SLC3A2P08195 630 aaKnown RBP10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 RLBP1P12271 317 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 SLC1A4P43007 532 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 MRPL12P52815 198 aaKnown RBP10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 PRSS12P56730 875 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 PLCB3Q01970 1234 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 PDE4BQ07343 736 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 PLEKHG4Q58EX7 1191 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 KIAA1211Q6ZU35 1233 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 FBXO16Q8IX29 292 aaPredicted RBP10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 FAM178BQ8IXR5 827 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 GJD3Q8N144 294 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 AFAP1L1Q8TED9 768 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 WDR11Q9BZH6 1224 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 FTOQ9C0B1 505 aaKnown RBP eCLIP10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 DNAAF2Q9NVR5 837 aaKnown RBP10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 DDX41Q9UJV9 622 aaKnown RBP10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 COL4A4P53420 1690 aaPredicted RBP10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 PTPRSQ13332 1948 aa10.84□□□□□ -0.67
MCF2L2-214ENST00000640043 MINDY4BA8MYZ0 360 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 RFXAPO00287 272 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 ICAM1P05362 532 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 TSPY3P0CV98 308 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 TSPY8P0CW00 308 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 CYP2C9P11712 490 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 ALAS1P13196 640 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 ERVK-21P61565 698 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 IKQ13123 557 aaPredicted RBP10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 EML3Q32P44 896 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 C6orf132Q5T0Z8 1188 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 RCSD1Q6JBY9 416 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 SESTD1Q86VW0 696 aa10.83□□□□□ -0.68
MCF2L2-214ENST00000640043 CKAP2LQ8IYA6 745 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms