RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TSPAN7P41732 249 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 TRIM32Q13049 653 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 MPRIPQ6WCQ1 1025 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 SYDE1Q6ZW31 735 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-220ENST00000639841 SAPCD2Q86UD0 394 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 ORAI3Q9BRQ5 295 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 PDP2Q9P2J9 529 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 CCNL1Q9UK58 526 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-220ENST00000639841 CORINQ9Y5Q5 1042 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 ATP10DQ9P241 1426 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 ADCY9O60503 1353 aa8.63□□□□□ -1.03
NECAP1-220ENST00000639841 NCAM2O15394 837 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 TBX1O43435 398 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 AP1G1O43747 822 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 MTA2O94776 668 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 CPP00450 1065 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 IFIT1P09914 478 aaKnown RBP8.62□□□□□ -1.03
NECAP1-220ENST00000639841 HSPA6P17066 643 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 G3BP1Q13283 466 aaKnown RBP eCLIP8.62□□□□□ -1.03
NECAP1-220ENST00000639841 RRP12Q5JTH9 1297 aaKnown RBP8.62□□□□□ -1.03
NECAP1-220ENST00000639841 GPATCH4Q5T3I0 446 aaKnown RBP8.62□□□□□ -1.03
NECAP1-220ENST00000639841 AGAP9Q5VTM2 703 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 SLC6A19Q695T7 634 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 TLDC1Q6P9B6 456 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 NLRC3Q7RTR2 1065 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 ZNF227Q86WZ6 799 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 SMC1BQ8NDV3 1235 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 PAWRQ96IZ0 340 aaKnown RBP8.62□□□□□ -1.03
NECAP1-220ENST00000639841 COG3Q96JB2 828 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 TPCN1Q9ULQ1 816 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 PCDH11XQ9BZA7 1347 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 PCDH11YQ9BZA8 1340 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 SLC22A31A6NKX4 558 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 FAM155AB1AL88 458 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-220ENST00000639841 MMP20O60882 483 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 FKBP9O95302 570 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 ZBED1O96006 694 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 ADH1CP00326 375 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 ATP4AP20648 1035 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 NME2P22392 152 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 KRT85P78386 507 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 DSG1Q02413 1049 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 TBC1D10BQ4KMP7 808 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-220ENST00000639841 IFIT1BQ5T764 474 aaKnown RBP8.62□□□□□ -1.03
NECAP1-220ENST00000639841 LLGL2Q6P1M3 1020 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 FKBP9P1Q75LS8 142 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 NCAPG2Q86XI2 1143 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 CHCHD4Q8N4Q1 142 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 MYCT1Q8N699 235 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 FAM156AQ8NDB6 213 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 AHCYL2Q96HN2 611 aaKnown RBP8.62□□□□□ -1.03
NECAP1-220ENST00000639841 NLRP3Q96P20 1036 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 BHLHE41Q9C0J9 482 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-220ENST00000639841 GMIPQ9P107 970 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 FBXO10Q9UK96 956 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 PCDHGB6Q9Y5F9 930 aa8.62□□□□□ -1.03
NECAP1-220ENST00000639841 BLACEA4D250 179 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 LRRC10BA6NIK2 292 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 PTGIRP43119 386 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 GABREP78334 506 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 LLGL1Q15334 1064 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 PDCD2Q16342 344 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-220ENST00000639841 DEPTORQ8TB45 409 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 RAPGEF4Q8WZA2 1011 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 TBCBQ99426 244 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 AGO4Q9HCK5 861 aaKnown RBP8.61□□□□□ -1.03
NECAP1-220ENST00000639841 DISC1Q9NRI5 854 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 APEX2Q9UBZ4 518 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 NFKBIEO00221 500 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 EFCAB14O75071 495 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 SASH3O75995 380 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 CNOT4O95628 575 aaKnown RBP8.61□□□□□ -1.03
NECAP1-220ENST00000639841 IL2P60568 153 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 PGM2L1Q6PCE3 622 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 SPOCD1Q6ZMY3 1216 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 NME9Q86XW9 330 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.61□□□□□ -1.03
NECAP1-220ENST00000639841 SLFN12Q8IYM2 578 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 ZBTB34Q8NCN2 500 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 TBC1D20Q96BZ9 403 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 EMC7Q9NPA0 242 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 ISY1Q9ULR0 285 aaKnown RBP8.61□□□□□ -1.03
NECAP1-220ENST00000639841 AFG3L2Q9Y4W6 797 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 TAF1LQ8IZX4 1826 aa8.61□□□□□ -1.03
NECAP1-220ENST00000639841 A0A1W2PP64 1363 aa8.6□□□□□ -1.03
NECAP1-220ENST00000639841 TATP17735 454 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-220ENST00000639841 SCP2P22307 547 aa8.6□□□□□ -1.03
NECAP1-220ENST00000639841 FLT3P36888 993 aa8.6□□□□□ -1.03
NECAP1-220ENST00000639841 PBX2P40425 430 aa8.6□□□□□ -1.03
NECAP1-220ENST00000639841 AMPHP49418 695 aa8.6□□□□□ -1.03
NECAP1-220ENST00000639841 CLK1P49759 484 aaKnown RBP8.6□□□□□ -1.03
NECAP1-220ENST00000639841 ZNF143P52747 638 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-220ENST00000639841 VPS53Q5VIR6 699 aa8.6□□□□□ -1.03
NECAP1-220ENST00000639841 ZCCHC8Q6NZY4 707 aaKnown RBP8.6□□□□□ -1.03
NECAP1-220ENST00000639841 ABHD17CQ6PCB6 329 aa8.6□□□□□ -1.03
NECAP1-220ENST00000639841 BICDL1Q6ZP65 573 aa8.6□□□□□ -1.03
NECAP1-220ENST00000639841 SRGAP1Q7Z6B7 1085 aa8.6□□□□□ -1.03
NECAP1-220ENST00000639841 ZNF513Q8N8E2 541 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-220ENST00000639841 EHBP1Q8NDI1 1231 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms