RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 CYP3A4P08684 503 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 VIL1P09327 827 aaKnown RBP12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 STAT2P52630 851 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 ERVK-24P63145 666 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 FKBP3Q00688 224 aaKnown RBP12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 PPP2R3AQ06190 1150 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 VWA3BQ502W6 1294 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 FAM26FQ5R3K3 315 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 USP17L6PQ6QN14 398 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 GPR161Q8N6U8 529 aaKnown RBP12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 MTMR14Q8NCE2 650 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 CHURC1Q8WUH1 139 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 PCMTD1Q96MG8 357 aaPredicted RBP12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 WDR24Q96S15 920 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 TTYH3Q9C0H2 523 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 SEMA6BQ9H3T3 888 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 LZTFL1Q9NQ48 299 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 PANK4Q9NVE7 773 aa12.56□□□□□ -0.4
HNRNPU-221ENST00000639824 POTEB3A0JP26 581 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 FAM196BA6NMK8 535 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 PLA2G4BP0C869 781 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 H2AFXP16104 143 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 COASYQ13057 564 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 ERCC6LQ2NKX8 1250 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 VARS2Q5ST30 1063 aaKnown RBP12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 POTEBQ6S5H4 581 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 DYMQ7RTS9 669 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 FAM83AQ86UY5 434 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 FAM160B2Q86V87 743 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 AGBL3Q8NEM8 1001 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 RABGGTAQ92696 567 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 GOLGA1Q92805 767 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 KHSRPQ92945 711 aaKnown RBP eCLIP12.55□□□□□ -0.48e-14■■■□□ 15.4
HNRNPU-221ENST00000639824 DNAJC19Q96DA6 116 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 PRMT6Q96LA8 375 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 CAMKK2Q96RR4 588 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 NAPGQ99747 312 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 CARD6Q9BX69 1037 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 NUCKS1Q9H1E3 243 aaKnown RBP12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 NDST4Q9H3R1 872 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 CDC23Q9UJX2 597 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
HNRNPU-221ENST00000639824 KIF13BQ9NQT8 1826 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 YDJCA8MPS7 323 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 EIF3CLB5ME19 914 aaKnown RBP12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 ATP8B1O43520 1251 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 KRT86O43790 486 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 KRT18P05783 430 aaKnown RBP12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 TUBBP07437 444 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 MUTP22033 750 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 RPA1P27694 616 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 HNRNPH3P31942 346 aaKnown RBP12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 WHAMMP3Q1A5X7 153 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 ZNF569Q5MCW4 686 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 LARGE2Q8N3Y3 721 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 ETNPPLQ8TBG4 499 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 EIF3CQ99613 913 aaKnown RBP12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 TSGA10Q9BZW7 698 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 ZNF70Q9UC06 446 aaPredicted RBP12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 DDX41Q9UJV9 622 aaKnown RBP12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 KIAA1024Q9UPX6 916 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 DNM3Q9UQ16 869 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 PCDHAC2Q9Y5I4 1007 aa12.54□□□□□ -0.4
HNRNPU-221ENST00000639824 FRMD3A2A2Y4 597 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 C21orf2O43822 256 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 ZNF76P36508 570 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 BMS1Q14692 1282 aaKnown RBP12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 NAA30Q147X3 362 aaPredicted RBP12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 KIF4BQ2VIQ3 1234 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 EDRF1Q3B7T1 1238 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 FBXO38Q6PIJ6 1188 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 SRGAP1Q7Z6B7 1085 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 GPBP1Q86WP2 473 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 GMLQ99445 158 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 NUDT12Q9BQG2 462 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 SLF1Q9BQI6 1058 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 POLR3CQ9BUI4 534 aaPredicted RBP12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 GINM1Q9NU53 330 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 FAM184BQ9ULE4 1060 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 PRR12Q9ULL5 1215 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 MRPL11Q9Y3B7 192 aaKnown RBP12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 COL4A3BPQ9Y5P4 624 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 V9GYY5 206 aaPredicted RBP12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 SSBP05455 408 aaKnown RBP eCLIP12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 NUDT7P0C024 238 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 MARSP56192 900 aaKnown RBP12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 PRR16Q569H4 304 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 PPP1R15BQ5SWA1 713 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 LRRC55Q6ZSA7 311 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 RSRC2Q7L4I2 434 aaKnown RBP12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 KCNK18Q7Z418 384 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 KIAA1328Q86T90 577 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 ACRBPQ8NEB7 543 aa12.53□□□□□ -0.4
HNRNPU-221ENST00000639824 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms