RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 IRS2Q9Y4H2 1338 aa12.02□□□□□ -0.49
SNIP1-204ENST00000638725 GRID2IPA4D2P6 1211 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 USP17L5A8MUK1 530 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 KCNQ2O43526 872 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 BAG3O95817 575 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 SEC24CP53992 1094 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 PPARDQ03181 441 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 ORC2Q13416 577 aaPredicted RBP12.01□□□□□ -0.49
SNIP1-204ENST00000638725 SLC18A3Q16572 532 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 TMEM119Q4V9L6 283 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 NAA35Q5VZE5 725 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 PROM2Q8N271 834 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 FAM133AQ8N9E0 248 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 DNAJC19Q96DA6 116 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 CEP95Q96GE4 821 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 WNK3Q9BYP7 1800 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 PSMD2Q13200 908 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 CDC37Q16543 378 aaPredicted RBP12.01□□□□□ -0.49
SNIP1-204ENST00000638725 FAM26FQ5R3K3 315 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 MAATS1Q7Z4T9 603 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 CD302Q8IX05 232 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 SYN2Q92777 582 aaPredicted RBP12.01□□□□□ -0.49
SNIP1-204ENST00000638725 ATP6V1G3Q96LB4 118 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 NUCKS1Q9H1E3 243 aaKnown RBP12.01□□□□□ -0.49
SNIP1-204ENST00000638725 EPN3Q9H201 632 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 LUC7LQ9NQ29 371 aaKnown RBP12.01□□□□□ -0.49
SNIP1-204ENST00000638725 PLAAQ9Y263 795 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 ESYT2A0FGR8 921 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 MEFVO15553 781 aaPredicted RBP12.01□□□□□ -0.49
SNIP1-204ENST00000638725 PPP1R37O75864 691 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 KIAA0754O94854 1291 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNIP1-204ENST00000638725 KLHL30Q0D2K2 578 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 PTGISQ16647 500 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 PTPROQ16827 1216 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 KCTD19Q17RG1 926 aaPredicted RBP12.01□□□□□ -0.49
SNIP1-204ENST00000638725 CEP85LQ5SZL2 805 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 OTUD6BQ8N6M0 293 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 USP38Q8NB14 1042 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 NEDD1Q8NHV4 660 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 ZNF473Q8WTR7 871 aaKnown RBP12.01□□□□□ -0.49
SNIP1-204ENST00000638725 RAB34Q9BZG1 259 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 GOLPH3Q9H4A6 298 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 PANK4Q9NVE7 773 aa12.01□□□□□ -0.49
SNIP1-204ENST00000638725 MYO1FO00160 1098 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 TNNI2P48788 182 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 ADCY7P51828 1080 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 IRX3P78415 501 aaPredicted RBP12□□□□□ -0.49
SNIP1-204ENST00000638725 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
SNIP1-204ENST00000638725 C16orf86Q6ZW13 317 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 DNAAF5Q86Y56 855 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 CNPY4Q8N129 248 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 WDR66Q8TBY9 1149 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 WHAMMQ8TF30 809 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 GPR101Q96P66 508 aaPredicted RBP12□□□□□ -0.49
SNIP1-204ENST00000638725 UIMC1Q96RL1 719 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 SRP68Q9UHB9 627 aaKnown RBP12□□□□□ -0.49
SNIP1-204ENST00000638725 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12□□□□□ -0.49
SNIP1-204ENST00000638725 HPDP32754 393 aaPredicted RBP12□□□□□ -0.49
SNIP1-204ENST00000638725 PPP4CP60510 307 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 ERVK-9P63128 1117 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 TNNC1P63316 161 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 HDLBPQ00341 1268 aaKnown RBP12□□□□□ -0.49
SNIP1-204ENST00000638725 HLTFQ14527 1009 aaKnown RBP eCLIP12□□□□□ -0.49
SNIP1-204ENST00000638725 PDIA5Q14554 519 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 UBE2SQ16763 222 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 ARHGAP27Q6ZUM4 889 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 NBPF5PQ86XG9 351 aaPredicted RBP12□□□□□ -0.49
SNIP1-204ENST00000638725 TRIM59Q8IWR1 403 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 PROCA1Q8NCQ7 364 aaPredicted RBP12□□□□□ -0.49
SNIP1-204ENST00000638725 RTFDC1Q9BY42 306 aaPredicted RBP12□□□□□ -0.49
SNIP1-204ENST00000638725 YY1AP1Q9H869 796 aa12□□□□□ -0.49
SNIP1-204ENST00000638725 ATXN2Q99700 1313 aaKnown RBP11.99□□□□□ -0.49
SNIP1-204ENST00000638725 DDX60LQ5H9U9 1706 aaKnown RBP11.99□□□□□ -0.49
SNIP1-204ENST00000638725 KCNK3O14649 394 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 HSPA9P38646 679 aaKnown RBP11.99□□□□□ -0.49
SNIP1-204ENST00000638725 MDH1P40925 334 aaKnown RBP11.99□□□□□ -0.49
SNIP1-204ENST00000638725 BTDP43251 543 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 FNTAP49354 379 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 GSTO1P78417 241 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 ITGB3BPQ13352 177 aaPredicted RBP11.99□□□□□ -0.49
SNIP1-204ENST00000638725 ASIC2Q16515 512 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 PRPF38AQ8NAV1 312 aaKnown RBP11.99□□□□□ -0.49
SNIP1-204ENST00000638725 OR2W6PQ8NHA6 318 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 MYCBPAPQ8TBZ2 947 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 LRRC27Q9C0I9 530 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 CENPHQ9H3R5 247 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 RIOX1Q9H6W3 641 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 ZNF287Q9HBT7 754 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 ANKIB1Q9P2G1 1089 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 H0YHG0 523 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 MYBP10242 640 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 ECHS1P30084 290 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 MNAT1P51948 309 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 EMC10Q5UCC4 262 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 FOXR2Q6PJQ5 311 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 NLRP14Q86W24 1093 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 DDX42Q86XP3 938 aaKnown RBP eCLIP11.99□□□□□ -0.49
SNIP1-204ENST00000638725 TAF4BQ92750 862 aa11.99□□□□□ -0.49
SNIP1-204ENST00000638725 CCT8L2Q96SF2 557 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms