RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	SCFD2	Q8WU76	684 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	TAF4B	Q92750	862 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	NUCKS1	Q9H1E3	243 aa	Known RBP	12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	MAGEF1	Q9HAY2	307 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	AGAP1	Q9UPQ3	857 aa		12.16	□□□□□ -0.46
STRADA-231	ENST00000638708	RGPD5	Q99666	1765 aa		12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	GC	P02774	474 aa		12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	RARA	P10276	462 aa		12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	ATP4A	P20648	1035 aa		12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	GCLC	P48506	637 aa	Predicted RBP	12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	PPARD	Q03181	441 aa		12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	COBLL1	Q53SF7	1204 aa		12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	TMED8	Q6PL24	325 aa	Predicted RBP	12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	DRAXIN	Q8NBI3	349 aa	Predicted RBP	12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	FAM207A	Q9NSI2	230 aa	Predicted RBP	12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	KBTBD4	Q9NVX7	518 aa		12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	CCDC88A	Q3V6T2	1871 aa		12.15	□□□□□ -0.46
STRADA-231	ENST00000638708	FLOT1	O75955	427 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	RTN3	O95197	1032 aa	Predicted RBP	12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	CHN1	P15882	459 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	ATP2A2	P16615	1042 aa	Known RBP	12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	CDC25C	P30307	473 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	MCM7	P33993	719 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	PAPOLA	P51003	745 aa	Known RBP	12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	KCNJ2	P63252	427 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	SEC23A	Q15436	765 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	MAN2A1	Q16706	1144 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	FAM133B	Q5BKY9	247 aa	Known RBP	12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	CMPK2	Q5EBM0	449 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	HGSNAT	Q68CP4	663 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	TMC4	Q7Z404	712 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	ERICH1	Q86X53	443 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	MDM1	Q8TC05	714 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	ACTRT1	Q8TDG2	376 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	ZFAND2B	Q8WV99	257 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	PBK	Q96KB5	322 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	TSC22D3	Q99576	134 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	RNF41	Q9H4P4	317 aa	Predicted RBP	12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	SH3BP1	Q9Y3L3	701 aa		12.15	□□□□□ -0.47
STRADA-231	ENST00000638708	CCDC188	H7C350	402 aa		12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	UBOX5	O94941	541 aa		12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	MBD4	O95243	580 aa		12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	MMP13	P45452	471 aa		12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	CTCF	P49711	727 aa	Predicted RBP	12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	DNA2	P51530	1060 aa		12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	DDX42	Q86XP3	938 aa	Known RBP eCLIP	12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	LRRC34	Q8IZ02	419 aa		12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	GBP7	Q8N8V2	638 aa	Predicted RBP	12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	TMX4	Q9H1E5	349 aa	Predicted RBP	12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	ECT2	Q9H8V3	914 aa		12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	ABCF3	Q9NUQ8	709 aa		12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	PNMA2	Q9UL42	364 aa		12.14	□□□□□ -0.47
STRADA-231	ENST00000638708	ATAD5	Q96QE3	1844 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	KIF13B	Q9NQT8	1826 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	ZPR1	O75312	459 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	OAS1	P00973	400 aa	Known RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	PCCA	P05165	728 aa	Predicted RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	FLT3	P36888	993 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	LACTB	P83111	547 aa	Predicted RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	EHHADH	Q08426	723 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	TAF11	Q15544	211 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	GALNTL6	Q49A17	601 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	TDRD12	Q587J7	1177 aa	Known RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	PIK3AP1	Q6ZUJ8	805 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	C4orf32	Q8N8J7	132 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	SEC14L1	Q92503	715 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	SYN2	Q92777	582 aa	Predicted RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	IFT74	Q96LB3	600 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	RAB17	Q9H0T7	212 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	CUEDC2	Q9H467	287 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	SLITRK6	Q9H5Y7	841 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	MMRN2	Q9H8L6	949 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	FAM114A2	Q9NRY5	505 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	IRAK4	Q9NWZ3	460 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	SLC4A4	Q9Y6R1	1079 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	GSG1L2	A8MUP6	293 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	EVI5	O60447	810 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	PPFIA2	O75334	1257 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	NPTXR	O95502	500 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	VIM	P08670	466 aa	Known RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	GNAT1	P11488	350 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	KLRC1	P26715	233 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	ARID4A	P29374	1257 aa	Predicted RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	KIF5B	P33176	963 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	SLC9C1	Q4G0N8	1177 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	SPICE1	Q8N0Z3	855 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	PRCC	Q92733	491 aa	Predicted RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	NAF1	Q96HR8	494 aa	Known RBP	12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	TXLNGY	Q9BZA5	131 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	CCSER1	Q9C0I3	900 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	ANKIB1	Q9P2G1	1089 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	TNKS	O95271	1327 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	CNTNAP5	Q8WYK1	1306 aa		12.13	□□□□□ -0.47
STRADA-231	ENST00000638708	DUOX1	Q9NRD9	1551 aa		12.12	□□□□□ -0.47
STRADA-231	ENST00000638708	UBR2	Q8IWV8	1755 aa		12.12	□□□□□ -0.47
STRADA-231	ENST00000638708	BTNL10	A8MVZ5	291 aa		12.12	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms