RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 PPP2R2AP63151 447 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 NR5A1Q13285 461 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 SAFBQ15424 915 aaKnown RBP eCLIP13.31□□□□□ -0.28
GFAP-228ENST00000638488 CACNA2D4Q7Z3S7 1137 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 MAATS1Q7Z4T9 603 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 RBM12BQ8IXT5 1001 aaKnown RBP13.31□□□□□ -0.28
GFAP-228ENST00000638488 TMTC2Q8N394 836 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 ENAHQ8N8S7 591 aaPredicted RBP13.31□□□□□ -0.28
GFAP-228ENST00000638488 ANKS4BQ8N8V4 417 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 CCDC197Q8NCU1 140 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 RAPGEF5Q92565 580 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 TAB2Q9NYJ8 693 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 RWDD2AQ9UIY3 292 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 PLAAQ9Y263 795 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 SRPRBQ9Y5M8 271 aaKnown RBP13.31□□□□□ -0.28
GFAP-228ENST00000638488 SPATA31A6Q5VVP1 1343 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 RASSF10A6NK89 507 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 KCNJ18B7U540 433 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 ATP2C2O75185 946 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 NPTXRO95502 500 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 CLTAP09496 248 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 FAM153BP0C7A2 387 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 CARSP49589 748 aaKnown RBP13.31□□□□□ -0.28
GFAP-228ENST00000638488 KCNJ12Q14500 433 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 FAM153CQ494X1 144 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 ARHGAP22Q7Z5H3 698 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 CPLX4Q7Z7G2 160 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 CRACR2BQ8N4Y2 399 aaPredicted RBP13.31□□□□□ -0.28
GFAP-228ENST00000638488 ZNF513Q8N8E2 541 aaPredicted RBP13.31□□□□□ -0.28
GFAP-228ENST00000638488 FAM81AQ8TBF8 368 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 WASF1Q92558 559 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 DTNBP1Q96EV8 351 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 CRNKL1Q9BZJ0 848 aaKnown RBP13.31□□□□□ -0.28
GFAP-228ENST00000638488 FAM153AQ9UHL3 310 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 TFR2Q9UP52 801 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 CTNND2Q9UQB3 1225 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 TIAM2Q8IVF5 1701 aa13.31□□□□□ -0.28
GFAP-228ENST00000638488 PYGLP06737 847 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 CDK17Q00537 523 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 UBXN1Q04323 297 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 PNMA8AQ86V59 439 aaPredicted RBP13.3□□□□□ -0.28
GFAP-228ENST00000638488 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 BRIP1Q9BX63 1249 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 OSBPL1AQ9BXW6 950 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 DCP1AQ9NPI6 582 aaPredicted RBP13.3□□□□□ -0.28
GFAP-228ENST00000638488 ZNHIT6Q9NWK9 470 aaKnown RBP13.3□□□□□ -0.28
GFAP-228ENST00000638488 LMCD1Q9NZU5 365 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 CEP131Q9UPN4 1083 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 MYH13Q9UKX3 1938 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 ZNF831Q5JPB2 1677 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
GFAP-228ENST00000638488 MMP1P03956 469 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 VIMP08670 466 aaKnown RBP13.3□□□□□ -0.28
GFAP-228ENST00000638488 CNGA1P29973 690 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 DPYDQ12882 1025 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 SEC23AQ15436 765 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 RILPL1Q5EBL4 403 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 SMCR8Q8TEV9 937 aaPredicted RBP13.3□□□□□ -0.28
GFAP-228ENST00000638488 RPGRQ92834 1020 aaKnown RBP13.3□□□□□ -0.28
GFAP-228ENST00000638488 CENPTQ96BT3 561 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 EPAS1Q99814 870 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 MCM9Q9NXL9 1143 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 VPS54Q9P1Q0 977 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 ANAPC4Q9UJX5 808 aa13.3□□□□□ -0.28
GFAP-228ENST00000638488 MACROD2A1Z1Q3 448 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 SMIM24O75264 130 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 HEXIM1O94992 359 aaKnown RBP13.29□□□□□ -0.28
GFAP-228ENST00000638488 PLEKHA8P1O95397 391 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 DEXIO95424 95 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 GLI1P08151 1106 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 KIF5BP33176 963 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 ABL2P42684 1182 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 MATR3P43243 847 aaKnown RBP eCLIP13.29□□□□□ -0.28
GFAP-228ENST00000638488 GRIN1Q05586 938 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 GRAPQ13588 217 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 DIXDC1Q155Q3 683 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 CATIPQ7Z7H3 387 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 ANKRD23Q86SG2 305 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 NCAPG2Q86XI2 1143 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 MB21D1Q8N884 522 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 GRAPLQ8TC17 118 aaPredicted RBP13.29□□□□□ -0.28
GFAP-228ENST00000638488 OXER1Q8TDS5 423 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 BICD1Q96G01 975 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 GORASP1Q9BQQ3 440 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 CNOT10Q9H9A5 744 aaKnown RBP13.29□□□□□ -0.28
GFAP-228ENST00000638488 RBM12Q9NTZ6 932 aaKnown RBP13.29□□□□□ -0.28
GFAP-228ENST00000638488 TSKSQ9UJT2 592 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 MTMR7Q9Y216 660 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 MYH2Q9UKX2 1941 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 STK36Q9NRP7 1315 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 NHSQ6T4R5 1651 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 TNRC6CQ9HCJ0 1690 aaKnown RBP13.29□□□□□ -0.28
GFAP-228ENST00000638488 LRRD1A4D1F6 860 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 LGALS16A8MUM7 142 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 RNF8O76064 485 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 USP17L8P0C7I0 530 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 HSPA1LP34931 641 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 CMPK2Q5EBM0 449 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 RETREG2Q8NC44 543 aa13.29□□□□□ -0.28
GFAP-228ENST00000638488 CHMP6Q96FZ7 201 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms