RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 FOSP01100 380 aaPredicted RBP14.35□□□□□ -0.11
GFAP-227ENST00000638400 SCG2P13521 617 aa14.35□□□□□ -0.11
GFAP-227ENST00000638400 CCL23P55773 120 aa14.35□□□□□ -0.11
GFAP-227ENST00000638400 SMAD3P84022 425 aaKnown RBP14.35□□□□□ -0.11
GFAP-227ENST00000638400 PTGISQ16647 500 aa14.35□□□□□ -0.11
GFAP-227ENST00000638400 KIAA0753Q2KHM9 967 aa14.35□□□□□ -0.11
GFAP-227ENST00000638400 C16orf59Q7L2K0 433 aa14.35□□□□□ -0.11
GFAP-227ENST00000638400 DEFB123Q8N688 67 aa14.35□□□□□ -0.11
GFAP-227ENST00000638400 CCDC155Q8N6L0 562 aa14.35□□□□□ -0.11
GFAP-227ENST00000638400 GIMAP8Q8ND71 665 aaPredicted RBP14.35□□□□□ -0.11
GFAP-227ENST00000638400 SENP7Q9BQF6 1050 aa14.35□□□□□ -0.11
GFAP-227ENST00000638400 UPF3BQ9BZI7 483 aaKnown RBP14.35□□□□□ -0.11
GFAP-227ENST00000638400 SCN10AQ9Y5Y9 1956 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 SMCO2A6NFE2 343 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 HAS3O00219 553 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 ITGB5P18084 799 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 PDIA3P30101 505 aaKnown RBP14.34□□□□□ -0.11
GFAP-227ENST00000638400 AKAP17AQ02040 695 aaKnown RBP14.34□□□□□ -0.11
GFAP-227ENST00000638400 AP3B2Q13367 1082 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 BFSP2Q13515 415 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 MTMR1Q13613 665 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 TOB2Q14106 344 aaPredicted RBP14.34□□□□□ -0.11
GFAP-227ENST00000638400 TMEM240Q5SV17 173 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 GDF6Q6KF10 455 aaPredicted RBP14.34□□□□□ -0.11
GFAP-227ENST00000638400 CYFIP1Q7L576 1253 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 CCDC12Q8WUD4 166 aaPredicted RBP14.34□□□□□ -0.11
GFAP-227ENST00000638400 ALG1Q9BT22 464 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 GTF2IRD1Q9UHL9 959 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 UBIAD1Q9Y5Z9 338 aa14.34□□□□□ -0.11
GFAP-227ENST00000638400 ESYT2A0FGR8 921 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 PRPF3O43395 683 aaKnown RBP14.33□□□□□ -0.12
GFAP-227ENST00000638400 LGALS2P05162 132 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 ACRP10323 421 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 IFNAR1P17181 557 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 FAM109BQ6ICB4 259 aaPredicted RBP14.33□□□□□ -0.12
GFAP-227ENST00000638400 ZNF365Q70YC5 407 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 Q7L0L9 218 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 RETREG2Q8NC44 543 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 PHKBQ93100 1093 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 IL17RAQ96F46 866 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 SCLYQ96I15 445 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 GPR20Q99678 358 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 C16orf70Q9BSU1 422 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 RNF26Q9BY78 433 aaPredicted RBP14.33□□□□□ -0.12
GFAP-227ENST00000638400 ANO3Q9BYT9 981 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 MTIF3Q9H2K0 278 aaKnown RBP14.33□□□□□ -0.12
GFAP-227ENST00000638400 BCAS3Q9H6U6 928 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 NCOA5Q9HCD5 579 aaKnown RBP14.33□□□□□ -0.12
GFAP-227ENST00000638400 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 PDRG1Q9NUG6 133 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 HDAC6Q9UBN7 1215 aa14.33□□□□□ -0.12
GFAP-227ENST00000638400 MAFGO15525 162 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 FGBP02675 491 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 PFKMP08237 780 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 KCNA2P16389 499 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 RFC2P35250 354 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 SREBF1P36956 1147 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 CLK2P49760 499 aaKnown RBP14.32□□□□□ -0.12
GFAP-227ENST00000638400 ANAPC15P60006 121 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 CCT2P78371 535 aaKnown RBP14.32□□□□□ -0.12
GFAP-227ENST00000638400 SP4Q02446 784 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 NTRK3Q16288 839 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 PKN1Q16512 942 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 RASIP1Q5U651 963 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 MCTP2Q6DN12 878 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 RPUSD2Q8IZ73 545 aaKnown RBP14.32□□□□□ -0.12
GFAP-227ENST00000638400 CAGE1Q8TC20 777 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 HERVK_113Q902F9 699 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 ZNF274Q96GC6 653 aaPredicted RBP14.32□□□□□ -0.12
GFAP-227ENST00000638400 PGBD1Q96JS3 809 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 CTAGE1Q96RT6 745 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 SLC26A6Q9BXS9 759 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 C6orf50Q9HD87 102 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 JADE2Q9NQC1 790 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 KIAA1217Q5T5P2 1943 aa14.32□□□□□ -0.12
GFAP-227ENST00000638400 LAMA2P24043 3122 aaKnown RBP14.32□□□□□ -0.12
GFAP-227ENST00000638400 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.31□□□□□ -0.12
GFAP-227ENST00000638400 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.31□□□□□ -0.12
GFAP-227ENST00000638400 H3BRB1 525 aa14.31□□□□□ -0.12
GFAP-227ENST00000638400 TRAK2O60296 914 aa14.31□□□□□ -0.12
GFAP-227ENST00000638400 ZNF697Q5TEC3 545 aa14.31□□□□□ -0.12
GFAP-227ENST00000638400 TRIM22Q8IYM9 498 aa14.31□□□□□ -0.12
GFAP-227ENST00000638400 REXO1Q8N1G1 1221 aaKnown RBP14.31□□□□□ -0.12
GFAP-227ENST00000638400 CCDC148Q8NFR7 591 aa14.31□□□□□ -0.12
GFAP-227ENST00000638400 AFAP1L1Q8TED9 768 aa14.31□□□□□ -0.12
GFAP-227ENST00000638400 MXRA8Q9BRK3 442 aa14.31□□□□□ -0.12
GFAP-227ENST00000638400 ZMYND12Q9H0C1 365 aa14.31□□□□□ -0.12
GFAP-227ENST00000638400 TUT1Q9H6E5 874 aaKnown RBP14.31□□□□□ -0.12
GFAP-227ENST00000638400 TMEM260Q9NX78 707 aa14.31□□□□□ -0.12
GFAP-227ENST00000638400 ZNF215Q9UL58 517 aaPredicted RBP14.31□□□□□ -0.12
GFAP-227ENST00000638400 GOLGA6L3A6NEY3 463 aa14.3□□□□□ -0.12
GFAP-227ENST00000638400 CPLX1O14810 134 aa14.3□□□□□ -0.12
GFAP-227ENST00000638400 ATP9AO75110 1047 aa14.3□□□□□ -0.12
GFAP-227ENST00000638400 GNA11P29992 359 aa14.3□□□□□ -0.12
GFAP-227ENST00000638400 MCM2P49736 904 aa14.3□□□□□ -0.12
GFAP-227ENST00000638400 NUCB2P80303 420 aa14.3□□□□□ -0.12
GFAP-227ENST00000638400 ARHGAP4P98171 946 aa14.3□□□□□ -0.12
GFAP-227ENST00000638400 RBL2Q08999 1139 aa14.3□□□□□ -0.12
GFAP-227ENST00000638400 PTK7Q13308 1070 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms