RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ATP8B3O60423 1300 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 XPOTO43592 962 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 VAMP4O75379 141 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 MTMR3Q13615 1198 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 RRAGDQ9NQL2 400 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 MRPL11Q9Y3B7 192 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 PCDHA1Q9Y5I3 950 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 DIS3L2Q8IYB7 885 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 TBC1D22AQ8WUA7 517 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 RGL1Q9NZL6 768 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 MAN1A2O60476 641 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 PCYT1AP49585 367 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 MYRIPQ8NFW9 859 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 CALN1Q9BXU9 219 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 ZFYVE1Q9HBF4 777 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 COPRSQ9NQ92 184 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 MYH10P35580 1976 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 ESRRGP62508 458 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 CACNB2Q08289 660 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 SENP1Q9P0U3 644 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 CAPS2Q9BXY5 557 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 PCIF1Q9H4Z3 704 aa17.63■□□□□ 0.41
CACNA1A-258ENST00000638029 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 TFDP1Q14186 410 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 CYP4F22Q6NT55 531 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 MIS18BP1Q6P0N0 1132 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 CCDC84Q86UT8 332 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 PLA2G4DQ86XP0 818 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 GRK7Q8WTQ7 553 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 HEXIM2Q96MH2 286 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 HNRNPDLO14979 420 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 IFT43Q96FT9 208 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 KRT87PA6NCN2 255 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 VCAM1P19320 739 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 SMYD3Q9H7B4 428 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 DDIT3P35638 169 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 E2F4Q16254 413 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 NBPF20Q3BBV1 942 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 NBPF10Q6P3W6 841 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 NDUFAF2Q8N183 169 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 SIX6OS1Q8N1H7 587 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 PPP1R36Q96LQ0 422 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 CACNA2D2Q9NY47 1150 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 ARHGAP6O43182 974 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 LRRN2O75325 713 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 ASMTLO95671 621 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 CCT5P48643 541 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 TRIML1Q8N9V2 468 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 DBNDD1Q9H9R9 158 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 KLF15Q9UIH9 416 aa17.62■□□□□ 0.41
CACNA1A-258ENST00000638029 GIMAP4Q9NUV9 329 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 AARS2Q5JTZ9 985 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 ARHGAP18Q8N392 663 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 ZNF215Q9UL58 517 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 CAPZA2P47755 286 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 TBL3Q12788 808 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 IFT88Q13099 833 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 DARS2Q6PI48 645 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 MCF2L2Q86YR7 1114 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 SLFN12Q8IYM2 578 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 SNAP25P60880 206 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 WASHC5Q12768 1159 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 C1orf131Q8NDD1 294 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 TSC1Q92574 1164 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 ZNF518AQ6AHZ1 1483 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 POLR2FP61218 127 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 BASP1P80723 227 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 CIITAP33076 1130 aa17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 KHDRBS2Q5VWX1 349 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 FARP1Q9Y4F1 1045 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-258ENST00000638029 MOCS3O95396 460 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 TAF11Q15544 211 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 RBBP7Q16576 425 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 TCP11Q8WWU5 503 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 DESI2Q9BSY9 194 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 DRC3Q9H069 523 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 LBRQ14739 615 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 PPP2R5BQ15173 497 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 ABCB5Q2M3G0 1257 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 BCAS4Q8TDM0 211 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 NUDCD1Q96RS6 583 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 DBNDD2Q9BQY9 259 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 MTERF2Q49AM1 385 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 C11orf96Q7Z7L8 435 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 ENOX1Q8TC92 643 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 GPKOWQ92917 476 aaPredicted RBP eCLIP17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 YY1AP1Q9H869 796 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 DNAJC17Q9NVM6 304 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 KDM2BQ8NHM5 1336 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 TMEM232C9JQI7 657 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 ATG16L1Q676U5 607 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 ZNF577Q9BSK1 485 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 IFNA8P32881 189 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 ERFEQ4G0M1 354 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 FAM173BQ6P4H8 233 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 ZNF280CQ8ND82 737 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 NRBF2Q96F24 287 aa17.6■□□□□ 0.41
CACNA1A-258ENST00000638029 EIF4E1BA6NMX2 242 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-258ENST00000638029 ADRA2BP18089 450 aa17.59■□□□□ 0.41
CACNA1A-258ENST00000638029 GDAQ9Y2T3 454 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms