RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 SNX14Q9Y5W7 946 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 PLB1Q6P1J6 1458 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 EIF4A2Q14240 407 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 GRAMD1BQ3KR37 738 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 RDH13Q8NBN7 331 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 SLC12A1Q13621 1099 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 CCDC92Q53HC0 331 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 DPH5Q9H2P9 285 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 ZNF215Q9UL58 517 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 VAMP4O75379 141 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 NCF2P19878 526 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 KIRREL3Q8IZU9 778 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 ZNF263O14978 683 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 TOM1L1O75674 476 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 DLGAP5Q15398 846 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 ZC3H12BQ5HYM0 836 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 GPBP1L1Q9HC44 474 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 GUCY2CP25092 1073 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 YWHAHQ04917 246 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 NEK9Q8TD19 979 aa19.42■□□□□ 0.7
CACNA1A-247ENST00000637769 ANGPTL8Q6UXH0 198 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 ZC3H18Q86VM9 953 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 ZNF532Q9HCE3 1301 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 PRAG1Q86YV5 1406 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 PRPSAP2O60256 369 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 RPSAP08865 295 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 PSMA3P25788 255 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 TUBGCP2Q9BSJ2 902 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 PFKFB1P16118 471 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 FKBP3Q00688 224 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 DIABLOQ9NR28 239 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 ITM2BQ9Y287 266 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 H0Y626 953 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 TRIM16O95361 564 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 TECP42680 631 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 DNAJC24Q6P3W2 148 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 ZNF790Q6PG37 636 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 KLC2Q9H0B6 622 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 RASSF10A6NK89 507 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 E7EWF7 191 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 C8orf37Q96NL8 207 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 TRPC5Q9UL62 973 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 MYH6P13533 1939 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 TMED2Q15363 201 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 FAM47CQ5HY64 1035 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 BLZF1Q9H2G9 400 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 GCNT4Q9P109 453 aa19.41■□□□□ 0.7
CACNA1A-247ENST00000637769 SCG2P13521 617 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 DARS2Q6PI48 645 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 NCLNQ969V3 563 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 ATP8A1Q9Y2Q0 1164 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 GOLGA8IPA6NC78 632 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 ASPRV1Q53RT3 343 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 RNF139Q8WU17 664 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 APOBEC2Q9Y235 224 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 MYO18AQ92614 2054 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 CHRNA2Q15822 529 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 ICA1LQ8NDH6 482 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 RNF217Q8TC41 542 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 ZMYND12Q9H0C1 365 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 CNOT6LQ96LI5 555 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 FOXP1Q9H334 677 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 RNMTO43148 476 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 AFPP02771 609 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 RASSF7Q02833 373 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 ODR4Q5SWX8 454 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 RARS2Q5T160 578 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 CCNYQ8ND76 341 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 PHF21AQ96BD5 680 aa19.4■□□□□ 0.7
CACNA1A-247ENST00000637769 KPNA7A9QM74 516 aa19.39■□□□□ 0.7
CACNA1A-247ENST00000637769 GYG2O15488 501 aa19.39■□□□□ 0.7
CACNA1A-247ENST00000637769 KRT38O76015 456 aa19.39■□□□□ 0.7
CACNA1A-247ENST00000637769 PPARAQ07869 468 aa19.39■□□□□ 0.7
CACNA1A-247ENST00000637769 FAM26FQ5R3K3 315 aa19.39■□□□□ 0.7
CACNA1A-247ENST00000637769 NOP9Q86U38 636 aaKnown RBP19.39■□□□□ 0.7
CACNA1A-247ENST00000637769 CAPN12Q6ZSI9 719 aa19.39■□□□□ 0.7
CACNA1A-247ENST00000637769 ENAHQ8N8S7 591 aaPredicted RBP19.39■□□□□ 0.7
CACNA1A-247ENST00000637769 PYROXD1Q8WU10 500 aa19.39■□□□□ 0.7
CACNA1A-247ENST00000637769 NR1D1P20393 614 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 POLE2P56282 527 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 ZNF653Q96CK0 615 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 EDC4Q6P2E9 1401 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 KRT16P08779 473 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 LRRC4Q9HBW1 653 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 STK32BQ9NY57 414 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 HSPD1P10809 573 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 UGGT2Q9NYU1 1516 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 NR2F2P24468 414 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 IFNAR2P48551 515 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 TFAP4Q01664 338 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 CAPRIN1Q14444 709 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 MESDQ14696 234 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 MIS18BP1Q6P0N0 1132 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 WARS2Q9UGM6 360 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 STAT2P52630 851 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 PSMD2Q13200 908 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 ACBD5Q5T8D3 534 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 KIAA1841Q6NSI8 718 aa19.39■□□□□ 0.69
CACNA1A-247ENST00000637769 SBNO1A3KN83 1393 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms