RNA–Protein interactions for RNA: ENST00000636355.1

CLN3-248, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 975 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-248ENST00000636355 CELF2O95319 508 aaKnown RBP11.83□□□□□ -0.52
CLN3-248ENST00000636355 ITGB5P18084 799 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 SFNP31947 248 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 GJA5P36382 358 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 JAK3P52333 1124 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 CCNA1P78396 465 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 KRT76Q01546 638 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 BAATQ14032 418 aaPredicted RBP11.83□□□□□ -0.52
CLN3-248ENST00000636355 GPAT2Q6NUI2 795 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 OTOP1Q7RTM1 612 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 VSIG10LQ86VR7 867 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 GRAMD1CQ8IYS0 662 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 ENOX1Q8TC92 643 aaKnown RBP11.83□□□□□ -0.52
CLN3-248ENST00000636355 ERCC4Q92889 916 aaPredicted RBP11.83□□□□□ -0.52
CLN3-248ENST00000636355 BMP2KQ9NSY1 1161 aaPredicted RBP11.83□□□□□ -0.52
CLN3-248ENST00000636355 EXOC1Q9NV70 894 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 BTBD7Q9P203 1132 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 ZNFX1Q9P2E3 1918 aaKnown RBP11.83□□□□□ -0.52
CLN3-248ENST00000636355 NFASCO94856 1347 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 SYNRGQ9UMZ2 1314 aa11.83□□□□□ -0.52
CLN3-248ENST00000636355 MYH11P35749 1972 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 LYPLA2O95372 231 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 NR3C2P08235 984 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 EIF2AK2P19525 551 aaKnown RBP11.82□□□□□ -0.52
CLN3-248ENST00000636355 BMP6P22004 513 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 EDNRBP24530 442 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 ASIC1P78348 528 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 MRPS9P82933 396 aaKnown RBP11.82□□□□□ -0.52
CLN3-248ENST00000636355 PSMD2Q13200 908 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 CUL4BQ13620 913 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 DHX8Q14562 1220 aaKnown RBP11.82□□□□□ -0.52
CLN3-248ENST00000636355 PLS1Q14651 629 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 EPHA7Q15375 998 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 SPRYD7Q5W111 196 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 NCAPH2Q6IBW4 605 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 UNC13DQ70J99 1090 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 ABRAQ8N0Z2 381 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 GIMAP8Q8ND71 665 aaPredicted RBP11.82□□□□□ -0.52
CLN3-248ENST00000636355 IL31RAQ8NI17 732 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 MRFAP1L1Q96HT8 127 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 TAAR1Q96RJ0 339 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 PARK7Q99497 189 aaKnown RBP11.82□□□□□ -0.52
CLN3-248ENST00000636355 SENP7Q9BQF6 1050 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 MOV10L1Q9BXT6 1211 aaKnown RBP11.82□□□□□ -0.52
CLN3-248ENST00000636355 ZNF408Q9H9D4 720 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 AGO4Q9HCK5 861 aaKnown RBP11.82□□□□□ -0.52
CLN3-248ENST00000636355 MORF4L1Q9UBU8 362 aa11.82□□□□□ -0.52
CLN3-248ENST00000636355 MYH9P35579 1960 aaKnown RBP11.81□□□□□ -0.52
CLN3-248ENST00000636355 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 TESPA1A2RU30 521 aaPredicted RBP11.81□□□□□ -0.52
CLN3-248ENST00000636355 PSMA7O14818 248 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 KLRC4O43908 158 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 CNMDO75829 334 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 ITGBL1O95965 494 aaPredicted RBP11.81□□□□□ -0.52
CLN3-248ENST00000636355 SPATA31C1P0DKV0 1188 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 ICAM3P32942 547 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 EHHADHQ08426 723 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 NCAPHQ15003 741 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 ZNF746Q6NUN9 644 aaPredicted RBP11.81□□□□□ -0.52
CLN3-248ENST00000636355 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 CATSPER3Q86XQ3 398 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 SMAP1Q8IYB5 467 aaPredicted RBP11.81□□□□□ -0.52
CLN3-248ENST00000636355 ANKRD35Q8N283 1001 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 FAM133AQ8N9E0 248 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 LRRC15Q8TF66 581 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 HSD17B14Q9BPX1 270 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 EIF2AK1Q9BQI3 630 aaKnown RBP11.81□□□□□ -0.52
CLN3-248ENST00000636355 NMRK2Q9NPI5 230 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 RWDD2AQ9UIY3 292 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 DNM3Q9UQ16 869 aa11.81□□□□□ -0.52
CLN3-248ENST00000636355 CCL15-CCL14A0A0B4J2E2 113 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 BICDL2A1A5D9 508 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 FRMD3A2A2Y4 597 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 POTEFA5A3E0 1075 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 GOLGA6L6A8MZA4 724 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 WDR64B1ANS9 1081 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 POTEB2H3BUK9 544 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 DHX15O43143 795 aaKnown RBP11.8□□□□□ -0.52
CLN3-248ENST00000636355 DKC1O60832 514 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLN3-248ENST00000636355 MED24O75448 989 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 KIF20AO95235 890 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 ADCY5O95622 1261 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 EYA4O95677 639 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 TPM3P06753 285 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 PLA2G4BP0C869 781 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 ALDH5A1P51649 535 aaPredicted RBP11.8□□□□□ -0.52
CLN3-248ENST00000636355 SLC12A3P55017 1021 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 ERVK-9P63128 1117 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 ERVK-24P63145 666 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 UBXN2AP68543 259 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 HTRA3P83110 453 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 PAK1Q13153 545 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 MCM6Q14566 821 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 STXBP2Q15833 593 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 CCL15Q16663 113 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 POTEEQ6S8J3 1075 aa11.8□□□□□ -0.52
CLN3-248ENST00000636355 SMCR8Q8TEV9 937 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms