RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	STK24	Q9Y6E0	443 aa		10.79	□□□□□ -0.68
CACNA1A-223	ENST00000636058	MCM3AP	O60318	1980 aa		10.79	□□□□□ -0.68
CACNA1A-223	ENST00000636058	NFASC	O94856	1347 aa		10.79	□□□□□ -0.68
CACNA1A-223	ENST00000636058	EML1	O00423	815 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	SLC26A4	O43511	780 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	ACTN4	O43707	911 aa	Known RBP	10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	ECM2	O94769	699 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	TGFB3	P10600	412 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	RGS2	P41220	211 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	C1QTNF8	P60827	252 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	SP3	Q02447	781 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	KARS	Q15046	597 aa	Known RBP	10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	LONRF3	Q496Y0	759 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	HYI	Q5T013	277 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	KRT79	Q5XKE5	535 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	HAUS3	Q68CZ6	603 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	NCAPH2	Q6IBW4	605 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	KRBA2	Q6ZNG9	492 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	SEPT14	Q6ZU15	432 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	FBXO16	Q8IX29	292 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	PDILT	Q8N807	584 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	ERMN	Q8TAM6	284 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	SNX29	Q8TEQ0	813 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	TRIM47	Q96LD4	638 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	SENP7	Q9BQF6	1050 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	PANK2	Q9BZ23	570 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	ARHGAP39	Q9C0H5	1083 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	NUP62CL	Q9H1M0	184 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	UNC45A	Q9H3U1	944 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	PKD2L1	Q9P0L9	805 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	CCDC39	Q9UFE4	941 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	USP25	Q9UHP3	1055 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	DOCK3	Q8IZD9	2030 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	SYNGAP1	Q96PV0	1343 aa		10.78	□□□□□ -0.68
CACNA1A-223	ENST00000636058	SNAI1	O95863	264 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	IGHA2	P01877	340 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SLFN14	P0C7P3	912 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PSMC4	P43686	418 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KRT76	Q01546	638 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SP2	Q02086	613 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	GRB10	Q13322	594 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ZSCAN23	Q3MJ62	389 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	TMEM119	Q4V9L6	283 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	NAALADL2	Q58DX5	795 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PDXDC2P	Q6P474	469 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KCNV1	Q6PIU1	500 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	RBM43	Q6ZSC3	357 aa	Known RBP	10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	EEPD1	Q7L9B9	569 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	IQUB	Q8NA54	791 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CNNM3	Q8NE01	707 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	LRRC15	Q8TF66	581 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	DHX58	Q96C10	678 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CALML4	Q96GE6	196 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PNMA5	Q96PV4	448 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	APBA2	Q99767	749 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	HSD17B14	Q9BPX1	270 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SDF4	Q9BRK5	362 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	TINF2	Q9BSI4	451 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KATNBL1	Q9H079	304 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	TNMD	Q9H2S6	317 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	VTA1	Q9NP79	307 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SERTAD1	Q9UHV2	236 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KDM3A	Q9Y4C1	1321 aa		10.77	□□□□□ -0.69
CACNA1A-223	ENST00000636058	DOCK5	Q9H7D0	1870 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CASP8AP2	Q9UKL3	1982 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	RBM47	A0AV96	593 aa	Known RBP	10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	DDX39A	O00148	427 aa	Known RBP	10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	GPR25	O00155	361 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CTAGE5	O15320	804 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CHMP2A	O43633	222 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	MED24	O75448	989 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ARIH2	O95376	493 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CCNE2	O96020	404 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SPATA31C1	P0DKV0	1188 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	XRCC5	P13010	732 aa	Known RBP	10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	PLCG1	P19174	1290 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CYP2B6	P20813	491 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	UBA1	P22314	1058 aa	Known RBP	10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	RPA1	P27694	616 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SFN	P31947	248 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CCT6A	P40227	531 aa	Known RBP	10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	STAT6	P42226	847 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	JAK3	P52333	1124 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CAP1	Q01518	475 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	IRF5	Q13568	498 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	KIF22	Q14807	665 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	EPHA7	Q15375	998 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CAMK4	Q16566	473 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	ECM1	Q16610	540 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	RRAGB	Q5VZM2	374 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	OLFML2B	Q68BL8	750 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	TAPT1	Q6NXT6	567 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CCDC62	Q6P9F0	684 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	SH3RF1	Q7Z6J0	888 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	CATSPER3	Q86XQ3	398 aa		10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.76	□□□□□ -0.69
CACNA1A-223	ENST00000636058	RDM1	Q8NG50	284 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms