RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 MKRN1Q9UHC7 482 aaKnown RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 POU2F3Q9UKI9 436 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 AP4E1Q9UPM8 1137 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 DLGAP4Q9Y2H0 992 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ZBTB1Q9Y2K1 713 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 SAMHD1Q9Y3Z3 626 aaKnown RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 GPC6Q9Y625 555 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 STK24Q9Y6E0 443 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 USP3Q9Y6I4 520 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ZHX2Q9Y6X8 837 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 COL5A1P20908 1838 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 NF1P21359 2839 aa-0.6□□□□□ -2.5
CDKL5-210ENST00000636046 IGLV3-10A0A075B6K4 115 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 LOC102724428A0A0B4J2F2 783 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 FAM177BA6PVY3 158 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SFI1A8K8P3 1242 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF785A8K8V0 405 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 NOTOA8MTQ0 251 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SOCS2O14508 198 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF354AO60765 605 aaPredicted RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 KDM4AO75164 1064 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 BCAR3O75815 825 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 DKK1O94907 266 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 CNOT4O95628 575 aaKnown RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 GNRH1P01148 92 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 PRKCGP05129 697 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 CD1AP06126 327 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SNRPB2P08579 225 aaKnown RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 PIM1P11309 404 aaPredicted RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 NCAM1P13591 858 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 PLA2G2AP14555 144 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 EN2P19622 333 aaPredicted RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 EPHA1P21709 976 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 TNFRSF8P28908 595 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 PCSK6P29122 969 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 HOXD3P31249 432 aaPredicted RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 GLIPR1P48060 266 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ARL4DP49703 201 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 CRISP1P54107 249 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ATP12AP54707 1039 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 NRLP54845 237 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SIK1P57059 783 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 USP46P62068 366 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ERVK-9P63128 1117 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SNW1Q13573 536 aaKnown RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 CCINQ13939 588 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 KRT32Q14532 448 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 RRP1BQ14684 758 aaKnown RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 CBX2Q14781 532 aaPredicted RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 TLR1Q15399 786 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SLC14A2Q15849 920 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 AKAP4Q5JQC9 854 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 DAB2IPQ5VWQ8 1189 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 PMS2CLQ68D20 193 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 DESI1Q6ICB0 168 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF549Q6P9A3 640 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ZCCHC12Q6PEW1 402 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 LYPD8Q6UX82 237 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 RPTNQ6XPR3 784 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF497Q6ZNH5 498 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 LRRC55Q6ZSA7 311 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 STXBP4Q6ZWJ1 553 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 KRT26Q7Z3Y9 468 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ZBTB33Q86T24 672 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 THEMISQ8N1K5 641 aaPredicted RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 LCORLQ8N3X6 602 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 LINC00612Q8N6U2 182 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 BANK1Q8NDB2 785 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ZNF248Q8NDW4 579 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 PRR7Q8TB68 274 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 HASPINQ8TF76 798 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SLC7A3Q8WY07 619 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 CSRNP3Q8WYN3 585 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 KRT35Q92764 455 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ST6GALNAC6Q969X2 333 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 DDX27Q96GQ7 796 aaKnown RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 XAGE2Q96GT9 111 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 HIC2Q96JB3 615 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 INPP4AQ96PE3 977 aaPredicted RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 KLF6Q99612 283 aaPredicted RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ARHGAP9Q9BRR9 750 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 VPS16Q9H269 839 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 GGNBP2Q9H3C7 697 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 ESF1Q9H501 851 aaKnown RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 IL21RQ9HBE5 538 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SDF2L1Q9HCN8 221 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 RETNQ9HD89 108 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SELENONQ9NZV5 590 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 MARCOQ9UEW3 520 aaPredicted RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 AFG3L2Q9Y4W6 797 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 HS3ST4Q9Y661 456 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 EPN1Q9Y6I3 576 aaPredicted RBP-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SLC30A1Q9Y6M5 507 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 SHANK1Q9Y566 2161 aa-0.6□□□□□ -2.51
CDKL5-210ENST00000636046 FRMPD2Q68DX3 1309 aaPredicted RBP-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 LAMA5O15230 3695 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 IGKV1D-43A0A0B4J1Z2 117 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 A0A1W2PQM1 296 aa-0.61□□□□□ -2.51
CDKL5-210ENST00000636046 LRCOL1A6NCL2 159 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms