RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 NDST4Q9H3R1 872 aa13.83□□□□□ -0.2
UBASH3A-209ENST00000635325 ZBTB21Q9ULJ3 1066 aa13.83□□□□□ -0.2
UBASH3A-209ENST00000635325 SIK3Q9Y2K2 1263 aa13.83□□□□□ -0.2
UBASH3A-209ENST00000635325 SMCHD1A6NHR9 2005 aa13.82□□□□□ -0.2
UBASH3A-209ENST00000635325 MSH4O15457 936 aa13.82□□□□□ -0.2
UBASH3A-209ENST00000635325 SPATA31C1P0DKV0 1188 aa13.82□□□□□ -0.2
UBASH3A-209ENST00000635325 SLC12A3P55017 1021 aa13.82□□□□□ -0.2
UBASH3A-209ENST00000635325 MIGA2Q7L4E1 593 aa13.82□□□□□ -0.2
UBASH3A-209ENST00000635325 TBC1D5Q92609 795 aa13.82□□□□□ -0.2
UBASH3A-209ENST00000635325 VEZTQ9HBM0 779 aa13.82□□□□□ -0.2
UBASH3A-209ENST00000635325 FAM207AQ9NSI2 230 aaPredicted RBP13.82□□□□□ -0.2
UBASH3A-209ENST00000635325 TMX2Q9Y320 296 aa13.82□□□□□ -0.2
UBASH3A-209ENST00000635325 FOSP01100 380 aaPredicted RBP13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 CLCN6P51797 869 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 ZYXQ15942 572 aaKnown RBP13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 MAN2A1Q16706 1144 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 TSR1Q2NL82 804 aaKnown RBP13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 CCDC174Q6PII3 467 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 RSRC2Q7L4I2 434 aaKnown RBP13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 NELFCDQ8IXH7 590 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 OGFOD1Q8N543 542 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 JDP2Q8WYK2 163 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 ARHGEF10LQ9HCE6 1279 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 BMP2KQ9NSY1 1161 aaPredicted RBP13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 SYNPO2Q9UMS6 1093 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 A0A1W2PQJ5 194 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 CTAGE9A4FU28 777 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 TBX3O15119 743 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 HOXA7P31268 230 aaPredicted RBP13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 KIF4BQ2VIQ3 1234 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 HERC4Q5GLZ8 1057 aaPredicted RBP13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 FIGNQ5HY92 759 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 TEX35Q5T0J7 233 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 MCTP2Q6DN12 878 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 SLC30A10Q6XR72 485 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 CCDC155Q8N6L0 562 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 TSG101Q99816 390 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 GLIS2Q9BZE0 524 aaPredicted RBP13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 ZSWIM4Q9H7M6 989 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 NHEJ1Q9H9Q4 299 aaPredicted RBP13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 VAV3Q9UKW4 847 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 GUCA1BQ9UMX6 200 aa13.81□□□□□ -0.2
UBASH3A-209ENST00000635325 RCCD1A6NED2 376 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 PIK3CDO00329 1044 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 CIITAP33076 1130 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 RASSF7Q02833 373 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 CXCL9Q07325 125 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 PABPC4Q13310 644 aaKnown RBP eCLIP13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 HAUS3Q68CZ6 603 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 CCDC84Q86UT8 332 aaPredicted RBP13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 GPIHBP1Q8IV16 184 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 CCDC65Q8IXS2 484 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 AGBL3Q8NEM8 1001 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 SCFD1Q8WVM8 642 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 OGFRQ9NZT2 677 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 CDC23Q9UJX2 597 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 HDAC9Q9UKV0 1011 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 SCAF8Q9UPN6 1271 aaKnown RBP13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 ABCB11O95342 1321 aa13.8□□□□□ -0.2
UBASH3A-209ENST00000635325 IGLV3-22A0A075B6J6 115 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 FRMD3A2A2Y4 597 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 EML1O00423 815 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 TRAF5O00463 557 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 SLC26A4O43511 780 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 FGFR1OPO95684 399 aaKnown RBP13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 KRT18P05783 430 aaKnown RBP13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 PLEKP08567 350 aaPredicted RBP13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 RPA1P27694 616 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 CASP5P51878 434 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 CYP4A11Q02928 519 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 CIAPIN1Q6FI81 312 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 FAM20AQ96MK3 541 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 NAPGQ99747 312 aaPredicted RBP13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 ZHX3Q9H4I2 956 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 GOPCQ9HD26 462 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 ZNHIT6Q9NWK9 470 aaKnown RBP13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 PUF60Q9UHX1 559 aaKnown RBP13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 SHTN1A0MZ66 631 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 CFBP00751 764 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 CYP3A4P08684 503 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 ZSCAN20P17040 1043 aaPredicted RBP13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 FKBP3Q00688 224 aaKnown RBP13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 CYP27A1Q02318 531 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 FOXR2Q6PJQ5 311 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 WDR18Q9BV38 432 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 LACRTQ9GZZ8 138 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 KCTD10Q9H3F6 313 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 MMRN2Q9H8L6 949 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 PRDM10Q9NQV6 1147 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 MYO1AQ9UBC5 1043 aa13.79□□□□□ -0.2
UBASH3A-209ENST00000635325 ZNF263O14978 683 aa13.78□□□□□ -0.2
UBASH3A-209ENST00000635325 ZNF76P36508 570 aa13.78□□□□□ -0.2
UBASH3A-209ENST00000635325 PRELPP51888 382 aa13.78□□□□□ -0.2
UBASH3A-209ENST00000635325 UBXN2AP68543 259 aa13.78□□□□□ -0.2
UBASH3A-209ENST00000635325 GIT2Q14161 759 aa13.78□□□□□ -0.2
UBASH3A-209ENST00000635325 TNIP1Q15025 636 aa13.78□□□□□ -0.2
UBASH3A-209ENST00000635325 SRGAP1Q7Z6B7 1085 aa13.78□□□□□ -0.2
UBASH3A-209ENST00000635325 ERMNQ8TAM6 284 aa13.78□□□□□ -0.2
UBASH3A-209ENST00000635325 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms