RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 METTL16Q86W50 562 aaKnown RBP3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 LDLRAD3Q86YD5 345 aa3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 AMER2Q8N7J2 671 aa3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 SREK1Q8WXA9 508 aaKnown RBP3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 RNF34Q969K3 372 aa3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 SEMA4AQ9H3S1 761 aa3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 SF3B6Q9Y3B4 125 aaKnown RBP3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 BCORL1Q5H9F3 1711 aa3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 RAPGEF6Q8TEU7 1601 aa3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 A0A087X1B8 175 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 C2orf71A6NGG8 1288 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 COL6A1P12109 1028 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 KRTAP10-9P60411 292 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 NAALADL2Q58DX5 795 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 FNDC7Q5VTL7 733 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 UNC5AQ6ZN44 842 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 SLITRK4Q8IW52 837 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 TEX2Q8IWB9 1127 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 DNAJC10Q8IXB1 793 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 FAM126BQ8IXS8 530 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 DRC1Q96MC2 740 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 ADOQ96SZ5 270 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 AGAP2Q99490 1192 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 L2HGDHQ9H9P8 463 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 PCDH18Q9HCL0 1135 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 MARCH2Q9P0N8 246 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 RBPJLQ9UBG7 517 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 ZDHHC9Q9Y397 364 aa3.8□□□□□ -1.8
SMARCB1-208ENST00000634926 NUP153P49790 1475 aaKnown RBP3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 C1SP09871 688 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 ITGA4P13612 1032 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 ZNF76P36508 570 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 ZNF165P49910 485 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 PURAQ00577 322 aaKnown RBP3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 APOBRQ0VD83 1088 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 NFATC3Q12968 1075 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 PRKD1Q15139 912 aaPredicted RBP3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 SF3A1Q15459 793 aaKnown RBP3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 INF2Q27J81 1249 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 LSM12Q3MHD2 195 aaKnown RBP3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 PHF19Q5T6S3 580 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 Q6ZSN1 163 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 MILR1Q7Z6M3 343 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 NT5DC4Q86YG4 428 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 NUDT10Q8NFP7 164 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 NEU4Q8WWR8 484 aaPredicted RBP3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 NUDT11Q96G61 164 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 TGIF2Q9GZN2 237 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 DIS3Q9Y2L1 958 aaKnown RBP3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 MADDQ8WXG6 1647 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 TTC37Q6PGP7 1564 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 ATP10BO94823 1461 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 NEO1Q92859 1461 aa3.79□□□□□ -1.8
SMARCB1-208ENST00000634926 PCF11O94913 1555 aaKnown RBP3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 CFAP74Q9C0B2 1584 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 A0A087WZG4 1122 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 NPHP3-ACAD11A0A0J9YXS1 232 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 THBDP07204 575 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 SEPHS1P49903 392 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 PTH1RQ03431 593 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 AGBL4Q5VU57 503 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 LRCH2Q5VUJ6 765 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 ZNF627Q7L945 461 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 ZC3H18Q86VM9 953 aaKnown RBP3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 DCP2Q8IU60 420 aaKnown RBP3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 KLHL36Q8N4N3 616 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 LARP4BQ92615 738 aaKnown RBP3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 SMARCC1Q92922 1105 aaPredicted RBP3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 VOPP1Q96AW1 172 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 KLHL25Q9H0H3 589 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 CSRNP2Q9H175 543 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 GPRC5CQ9NQ84 441 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 CLEC1BQ9P126 229 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 CROTQ9UKG9 612 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 ZNF214Q9UL59 606 aaPredicted RBP3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 ZNRF3Q9ULT6 936 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 BACE2Q9Y5Z0 518 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 EFCAB5A4FU69 1503 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 LMTK3Q96Q04 1460 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 CD109Q6YHK3 1445 aa3.78□□□□□ -1.8
SMARCB1-208ENST00000634926 ARNTLO00327 626 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 NPHS1O60500 1241 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 PAMP19021 973 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 FPR2P25090 351 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 COL10A1Q03692 680 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 CYP4F3Q08477 520 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 Q6ZPA2 131 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 SCUBE1Q8IWY4 988 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 SLC43A3Q8NBI5 491 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 ARRDC4Q8NCT1 418 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 IL17DQ8TAD2 202 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 UBXN4Q92575 508 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 NKD1Q969G9 470 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 TINF2Q9BSI4 451 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 BTG4Q9NY30 223 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 ADAM29Q9UKF5 820 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 LRRIQ1Q96JM4 1722 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 PTPRMP28827 1452 aa3.77□□□□□ -1.81
SMARCB1-208ENST00000634926 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMARCB1-208ENST00000634926 C22orf46C9J442 243 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms