RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 MMP3P08254 477 aa22.03■■□□□ 1.12
CROCCP4-202ENST00000633627 LETM2Q2VYF4 491 aa22.03■■□□□ 1.12
CROCCP4-202ENST00000633627 BRDTQ58F21 947 aaPredicted RBP22.03■■□□□ 1.12
CROCCP4-202ENST00000633627 IFFO2Q5TF58 517 aa22.03■■□□□ 1.12
CROCCP4-202ENST00000633627 PPP4R3AQ6IN85 833 aa22.03■■□□□ 1.12
CROCCP4-202ENST00000633627 FERMT2Q96AC1 680 aa22.03■■□□□ 1.12
CROCCP4-202ENST00000633627 SPATA33Q96N06 139 aa22.03■■□□□ 1.12
CROCCP4-202ENST00000633627 FOXD4L1Q9NU39 408 aa22.03■■□□□ 1.12
CROCCP4-202ENST00000633627 PKD2L1Q9P0L9 805 aa22.03■■□□□ 1.12
CROCCP4-202ENST00000633627 TELO2Q9Y4R8 837 aa22.03■■□□□ 1.12
CROCCP4-202ENST00000633627 A0A1W2PQ45 241 aaPredicted RBP22.02■■□□□ 1.12
CROCCP4-202ENST00000633627 A0A1W2PQY0 241 aa22.02■■□□□ 1.12
CROCCP4-202ENST00000633627 DHX15O43143 795 aaKnown RBP22.02■■□□□ 1.12
CROCCP4-202ENST00000633627 GCFC2P16383 781 aaKnown RBP22.02■■□□□ 1.12
CROCCP4-202ENST00000633627 CXCL17Q6UXB2 119 aa22.02■■□□□ 1.12
CROCCP4-202ENST00000633627 NOSTRINQ8IVI9 506 aa22.02■■□□□ 1.12
CROCCP4-202ENST00000633627 SENP6Q9GZR1 1112 aaPredicted RBP22.02■■□□□ 1.12
CROCCP4-202ENST00000633627 POLR3EQ9NVU0 708 aa22.02■■□□□ 1.12
CROCCP4-202ENST00000633627 DNAH12Q6ZR08 3092 aa22.01■■□□□ 1.11
CROCCP4-202ENST00000633627 H3BQV1 296 aa22.01■■□□□ 1.11
CROCCP4-202ENST00000633627 IPO5O00410 1097 aaKnown RBP22.01■■□□□ 1.11
CROCCP4-202ENST00000633627 MSH4O15457 936 aa22.01■■□□□ 1.11
CROCCP4-202ENST00000633627 KPNA6O60684 536 aa22.01■■□□□ 1.11
CROCCP4-202ENST00000633627 PPFIA4O75335 1185 aa22.01■■□□□ 1.11
CROCCP4-202ENST00000633627 PDCP20941 246 aa22.01■■□□□ 1.11
CROCCP4-202ENST00000633627 PURAQ00577 322 aaKnown RBP22.01■■□□□ 1.11
CROCCP4-202ENST00000633627 NAP1L4Q99733 375 aaKnown RBP22.01■■□□□ 1.11
CROCCP4-202ENST00000633627 SCN10AQ9Y5Y9 1956 aa22■■□□□ 1.11
CROCCP4-202ENST00000633627 WNT7AO00755 349 aa22■■□□□ 1.11
CROCCP4-202ENST00000633627 SLC37A4O43826 429 aa22■■□□□ 1.11
CROCCP4-202ENST00000633627 CABYRO75952 493 aa22■■□□□ 1.11
CROCCP4-202ENST00000633627 SYT1P21579 422 aa22■■□□□ 1.11
CROCCP4-202ENST00000633627 DGKDQ16760 1214 aa22■■□□□ 1.11
CROCCP4-202ENST00000633627 GLT1D1Q96MS3 346 aa22■■□□□ 1.11
CROCCP4-202ENST00000633627 GPR20Q99678 358 aa22■■□□□ 1.11
CROCCP4-202ENST00000633627 ZNF577Q9BSK1 485 aa22■■□□□ 1.11
CROCCP4-202ENST00000633627 DDX25Q9UHL0 483 aaKnown RBP22■■□□□ 1.11
CROCCP4-202ENST00000633627 ELP1O95163 1332 aa22■■□□□ 1.11
CROCCP4-202ENST00000633627 CCNT1O60563 726 aaKnown RBP21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 MYL3P08590 195 aa21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 SLC39A5Q6ZMH5 540 aa21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 ETNPPLQ8TBG4 499 aa21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 SLC5A5Q92911 643 aa21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 UIMC1Q96RL1 719 aa21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 SDF4Q9BRK5 362 aa21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 MTG1Q9BT17 334 aaPredicted RBP21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 JPH1Q9HDC5 661 aaPredicted RBP21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 KCNMB3Q9NPA1 279 aa21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 TBC1D22BQ9NU19 505 aa21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 SLC9A2Q9UBY0 812 aa21.99■■□□□ 1.11
CROCCP4-202ENST00000633627 GSTTP1A0A1W2PQM5 241 aa21.98■■□□□ 1.11
CROCCP4-202ENST00000633627 NOP56O00567 594 aaKnown RBP21.98■■□□□ 1.11
CROCCP4-202ENST00000633627 GNL2Q13823 731 aaKnown RBP21.98■■□□□ 1.11
CROCCP4-202ENST00000633627 SNX17Q15036 470 aa21.98■■□□□ 1.11
CROCCP4-202ENST00000633627 C1orf53Q5VUE5 145 aa21.98■■□□□ 1.11
CROCCP4-202ENST00000633627 MCTP1Q6DN14 999 aa21.98■■□□□ 1.11
CROCCP4-202ENST00000633627 KAT2BQ92831 832 aa21.98■■□□□ 1.11
CROCCP4-202ENST00000633627 RIT2Q99578 217 aa21.98■■□□□ 1.11
CROCCP4-202ENST00000633627 STARD7Q9NQZ5 370 aa21.98■■□□□ 1.11
CROCCP4-202ENST00000633627 GRIN2DO15399 1336 aa21.98■■□□□ 1.11
CROCCP4-202ENST00000633627 PDE4DIPQ5VU43 2346 aa21.97■■□□□ 1.11
CROCCP4-202ENST00000633627 CCNE2O96020 404 aa21.97■■□□□ 1.11
CROCCP4-202ENST00000633627 TRAPPC10P48553 1259 aa21.97■■□□□ 1.11
CROCCP4-202ENST00000633627 SP4Q02446 784 aa21.97■■□□□ 1.11
CROCCP4-202ENST00000633627 LRRC26Q2I0M4 334 aa21.97■■□□□ 1.11
CROCCP4-202ENST00000633627 SEPT1Q8WYJ6 367 aa21.97■■□□□ 1.11
CROCCP4-202ENST00000633627 C16orf70Q9BSU1 422 aa21.97■■□□□ 1.11
CROCCP4-202ENST00000633627 ALPK3Q96L96 1907 aa21.97■■□□□ 1.11
CROCCP4-202ENST00000633627 TBX3O15119 743 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 PSMD10O75832 226 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 ATG7O95352 703 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 F2P00734 622 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 HSP90AA1P07900 732 aaKnown RBP21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 CDK7P50613 346 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 TOB1P50616 345 aaPredicted RBP21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 ATN1P54259 1190 aaPredicted RBP21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 ACTR2P61160 394 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 SLC43A3Q8NBI5 491 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 HAS1Q92839 578 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 GJA10Q969M2 543 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 FAM20AQ96MK3 541 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 HTATIP2Q9BUP3 242 aa21.96■■□□□ 1.11
CROCCP4-202ENST00000633627 VPS37CA5D8V6 355 aaPredicted RBP21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 DDX39AO00148 427 aaKnown RBP21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 HAS3O00219 553 aa21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 LGALS2P05162 132 aa21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 ATP2B1P20020 1258 aa21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 TCF7P36402 384 aaPredicted RBP21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 PSMC6P62333 389 aa21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 B3GNT9Q6UX72 402 aa21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 POTEDQ86YR6 584 aa21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 VTI1AQ96AJ9 217 aa21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 MTMR6Q9Y217 621 aa21.95■■□□□ 1.1
CROCCP4-202ENST00000633627 A0A0U1RQG5 324 aaPredicted RBP21.94■■□□□ 1.1
CROCCP4-202ENST00000633627 ARVCFO00192 962 aa21.94■■□□□ 1.1
CROCCP4-202ENST00000633627 ZNF286BP0CG31 522 aa21.94■■□□□ 1.1
CROCCP4-202ENST00000633627 ORC2Q13416 577 aaPredicted RBP21.94■■□□□ 1.1
CROCCP4-202ENST00000633627 ITGA7Q13683 1181 aa21.94■■□□□ 1.1
CROCCP4-202ENST00000633627 BECN1Q14457 450 aa21.94■■□□□ 1.1
CROCCP4-202ENST00000633627 TTC38Q5R3I4 469 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms