RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	CACNA2D3	Q8IZS8	1091 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RIC8A	Q9NPQ8	531 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SRGAP2B	P0DMP2	458 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	KRT33B	Q14525	404 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	FYB2	Q5VWT5	728 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	IFT20	Q8IY31	132 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CCDC170	Q8IYT3	715 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	KRT12	Q99456	494 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	UBN1	Q9NPG3	1134 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	FER1L4	A9Z1Z3	1794 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ABCB11	O95342	1321 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866		H7C0C1	242 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ATP6V1E1	P36543	226 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ATP5O	P48047	213 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TSPY1	Q01534	308 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	AP3B2	Q13367	1082 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MAPK6	Q16659	721 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	LONRF3	Q496Y0	759 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CFAP221	Q4G0U5	840 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	KAZN	Q674X7	775 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	DEFB132	Q7Z7B7	95 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	KLHL7	Q8IXQ5	586 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MAP4K1	Q92918	833 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	DDX27	Q96GQ7	796 aa	Known RBP	9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	GGA3	Q9NZ52	723 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	C1orf167	Q5SNV9	1468 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PHLPP2	Q6ZVD8	1323 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CDHR2	Q9BYE9	1310 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CLIC6	Q96NY7	704 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PCDHA6	Q9UN73	950 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PCDHA8	Q9Y5H6	950 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ZBTB5	O15062	677 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TNFAIP2	Q03169	654 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SCARF1	Q14162	830 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	BARGIN	Q6ZT62	677 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	DGKH	Q86XP1	1220 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	OR6J1	Q8NGC5	347 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RBSN	Q9H1K0	784 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	VPS37B	Q9H9H4	285 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	NKX1-1	Q15270	411 aa	Predicted RBP	9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RPS6KA2	Q15349	733 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TTC31	Q49AM3	519 aa	Predicted RBP	9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TTBK2	Q6IQ55	1244 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	EFCAB13	Q8IY85	973 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	OR6B3	Q8NGW1	331 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	HEXIM2	Q96MH2	286 aa	Known RBP	9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	USP28	Q96RU2	1077 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	STAP2	Q9UGK3	403 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RECQL	P46063	649 aa	Predicted RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	EPHB1	P54762	984 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PPP2R3A	Q06190	1150 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ZNF589	Q86UQ0	364 aa	Predicted RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	YAF2	Q8IY57	180 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	FBXO18	Q8NFZ0	1043 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	GRK7	Q8WTQ7	553 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	USH1C	Q9Y6N9	552 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PLA2R1	Q13018	1463 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CLIC2	O15247	247 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SLC4A1	P02730	911 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TFRC	P02786	760 aa	Known RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CYP21A2	P08686	494 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	GSPT1	P15170	499 aa	Known RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	DPEP1	P16444	411 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	KRT15	P19012	456 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CACNB1	Q02641	598 aa	Predicted RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	EXOC4	Q96A65	974 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ZNF302	Q9NR11	478 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	STK17A	Q9UEE5	414 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SNAP23	O00161	211 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CMA1	P23946	247 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MTX1	Q13505	466 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ALCAM	Q13740	583 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CTTN	Q14247	550 aa	Known RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CCDC157	Q569K6	752 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TRIML1	Q8N9V2	468 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ATP6V0A4	Q9HBG4	840 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TBC1D22B	Q9NU19	505 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SPHKAP	Q2M3C7	1700 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	LDHA	P00338	332 aa	Known RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	DDIT3	P35638	169 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PEX3	P56589	373 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TUBB2A	Q13885	445 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RSBN1L	Q6PCB5	846 aa	Predicted RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SCN4B	Q8IWT1	228 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	NDUFAF2	Q8N183	169 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	9.34	□□□□□ -0.91	3e-6	■■■■□ 20.9
SPTAN1-223	ENST00000630866	ZMAT2	Q96NC0	199 aa	Known RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TUBB2B	Q9BVA1	445 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	KIAA1468	Q9P260	1216 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	IMPACT	Q9P2X3	320 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TULP4	Q9NRJ4	1543 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SH2B2	O14492	632 aa	Predicted RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PRPF3	O43395	683 aa	Known RBP	9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MCPH1	Q8NEM0	835 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CBX8	Q9HC52	389 aa		9.34	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SPDYE2B	A6NHP3	402 aa		9.34	□□□□□ -0.92
SPTAN1-223	ENST00000630866		I3L4J1	428 aa		9.34	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms