RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ARHGEF16Q5VV41 709 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 MIER3Q7Z3K6 550 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 LDHDQ86WU2 507 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 GOLGA6L1Q8N7Z2 621 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 ADGRG1Q9Y653 693 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 A0A1B0GTH6 734 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 LRRC53A6NM62 1247 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 NDUFA10O95299 355 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 KLHL30Q0D2K2 578 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 E2F4Q16254 413 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 XKR9Q5GH70 373 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 LMBRD2Q68DH5 695 aaPredicted RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 HHIPL2Q6UWX4 724 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 HS2ST1Q7LGA3 356 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 CATSPER3Q86XQ3 398 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 TMTC1Q8IUR5 882 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 KLHL7Q8IXQ5 586 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 KIAA0895Q8NCT3 520 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 CHURC1Q8WUH1 139 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 RAD54LQ92698 747 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 MAP7D2Q96T17 732 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 NHEJ1Q9H9Q4 299 aaPredicted RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 CNOT7Q9UIV1 285 aaKnown RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 NUP98P52948 1817 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 TISP43B9A030 160 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 SARSP49591 514 aaKnown RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 DNM2P50570 870 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 NPEPPSP55786 919 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 ANGEL2Q5VTE6 544 aaKnown RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 GALNT17Q6IS24 598 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 CYFIP1Q7L576 1253 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 ZDHHC15Q96MV8 337 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 SCLT1Q96NL6 688 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 NAPGQ99747 312 aaPredicted RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 SEMA6BQ9H3T3 888 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 RIC8AQ9NPQ8 531 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 GPRC5CQ9NQ84 441 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 SH3GLB2Q9NR46 395 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 ATRNO75882 1429 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 K7ENM7 598 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 WNT10BO00744 389 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 EPHB6O15197 1021 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 PPP1R12BO60237 982 aaPredicted RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 FGFR1OPO95684 399 aaKnown RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 ARP10275 920 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 RCAN1P53805 252 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 PLA2G4FQ68DD2 849 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 GADL1Q6ZQY3 521 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 CERS3Q8IU89 383 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 BPIFA3Q9BQP9 254 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 MTA3Q9BTC8 594 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 CCDC94Q9BW85 323 aaPredicted RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 ARFGAP3Q9NP61 516 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 ARMCX3Q9UH62 379 aaPredicted RBP8.29□□□□□ -1.08
PKP4-217ENST00000628904 TOGARAM1Q9Y4F4 1720 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 CASP4P49662 377 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 GMPSP49915 693 aaPredicted RBP8.28□□□□□ -1.08
PKP4-217ENST00000628904 CASP5P51878 434 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 EHHADHQ08426 723 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 GRIPAP1Q4V328 841 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 SUPT20HQ8NEM7 779 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 PNMA5Q96PV4 448 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 REEP2Q9BRK0 252 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 WDR11Q9BZH6 1224 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 BCCIPQ9P287 314 aaKnown RBP eCLIP8.28□□□□□ -1.08
PKP4-217ENST00000628904 SPDYE2BA6NHP3 402 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 EML1O00423 815 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 SPDYE6P0CI01 402 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 XRCC5P13010 732 aaKnown RBP8.28□□□□□ -1.08
PKP4-217ENST00000628904 CLCN6P51797 869 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 OSTNP61366 133 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 COG2Q14746 738 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 KIAA0753Q2KHM9 967 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 KIAA1755Q5JYT7 1200 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 CCDC70Q6NSX1 233 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 NCAPG2Q86XI2 1143 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 REXO1L1PQ8IX06 675 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 GOLGA1Q92805 767 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 EIF2AK1Q9BQI3 630 aaKnown RBP8.28□□□□□ -1.08
PKP4-217ENST00000628904 MMTAG2Q9BU76 263 aaKnown RBP8.28□□□□□ -1.08
PKP4-217ENST00000628904 FAM107BQ9H098 131 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 DEFB129Q9H1M3 183 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 RIOX1Q9H6W3 641 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 MYO1AQ9UBC5 1043 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 MYH13Q9UKX3 1938 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 SMIM23A6NLE4 172 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 GFPT2O94808 682 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 ZNF18P17022 549 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 SLC9A1P19634 815 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 IGBP1P78318 339 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 C2orf54Q08AI8 447 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 ZNF746Q6NUN9 644 aaPredicted RBP8.28□□□□□ -1.08
PKP4-217ENST00000628904 ANKRD35Q8N283 1001 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 C4orf32Q8N8J7 132 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 HAS1Q92839 578 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 AK8Q96MA6 479 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 RMDN3Q96TC7 470 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 LACRTQ9GZZ8 138 aa8.28□□□□□ -1.08
PKP4-217ENST00000628904 BLOC1S4Q9NUP1 217 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms