RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 MAP2K2P36507 400 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 IGBP1P78318 339 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 GPR142Q7Z601 462 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 CABP7Q86V35 215 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 ESYT2A0FGR8 921 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 CD99L2Q8TCZ2 262 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 PURBQ96QR8 312 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 NAV1Q8NEY1 1877 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 ARHGEF35A5YM69 484 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 WDR11Q9BZH6 1224 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 RBPJLQ9UBG7 517 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 IPO5O00410 1097 aaKnown RBP13.9□□□□□ -0.19
SYNGAP1-207ENST00000628646 RAD51AP2Q09MP3 1159 aa13.9□□□□□ -0.19
SYNGAP1-207ENST00000628646 NPY5RQ15761 445 aa13.9□□□□□ -0.19
SYNGAP1-207ENST00000628646 TSR1Q2NL82 804 aaKnown RBP13.9□□□□□ -0.19
SYNGAP1-207ENST00000628646 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.19
SYNGAP1-207ENST00000628646 IQUBQ8NA54 791 aa13.9□□□□□ -0.19
SYNGAP1-207ENST00000628646 FBXO2Q9UK22 296 aaPredicted RBP13.9□□□□□ -0.19
SYNGAP1-207ENST00000628646 KIF13BQ9NQT8 1826 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 BIN1O00499 593 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 DYNC1LI2O43237 492 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 GSDMDP57764 484 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 ASIC1P78348 528 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 SETQ01105 290 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 Q3C1V9 767 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 ISM2Q6H9L7 571 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 PLA2G6O60733 806 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 MARK3P27448 753 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 LONRF3Q496Y0 759 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 NYAP1Q6ZVC0 841 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 ELOA2Q8IYF1 753 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 DNM3Q9UQ16 869 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 DDX60LQ5H9U9 1706 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 RIOK3O14730 519 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 USP11P51784 963 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 STIM1Q13586 685 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 FBXO16Q8IX29 292 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 ZIC5Q96T25 663 aa13.89□□□□□ -0.19
SYNGAP1-207ENST00000628646 POLR2DO15514 142 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 C6orf222P0C671 652 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 NEDD9Q14511 834 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 EARS2Q5JPH6 523 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 KLHL10Q6JEL2 608 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 SOCS4Q8WXH5 440 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 MORC2Q9Y6X9 1032 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 GGPS1O95749 300 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 MYL3P08590 195 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 CYP2C19P33261 490 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 FLT3LGP49771 235 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 METTL13Q8N6R0 699 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 STAMQ92783 540 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 TXNRD2Q9NNW7 524 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 KCNH3Q9ULD8 1083 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 FOXN1O15353 648 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 PDXDC2PQ6P474 469 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 CYFIP1Q7L576 1253 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 SMARCE1Q969G3 411 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 SPATA33Q96N06 139 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 PDCD2LQ9BRP1 358 aa13.88□□□□□ -0.19
SYNGAP1-207ENST00000628646 WNT7AO00755 349 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 XKR9Q5GH70 373 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 NT5DC1Q5TFE4 455 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 FAM160B1Q5W0V3 765 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 ARMCX5Q6P1M9 558 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 SCFD2Q8WU76 684 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 MED15Q96RN5 788 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 SUGCTQ9HAC7 445 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 CYP39A1Q9NYL5 469 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 IKBKBO14920 756 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 PNOCQ13519 176 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 FAM177A1Q8N128 213 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 TNFRSF25Q93038 417 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 ZNF214Q9UL59 606 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 EIF3JO75822 258 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 PTPREP23469 700 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 SARSP49591 514 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 NOM1Q5C9Z4 860 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 MIS18BP1Q6P0N0 1132 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 SV2BQ7L1I2 683 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 GJA10Q969M2 543 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 TMEM106CQ9BVX2 250 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 XPO4Q9C0E2 1151 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 LRRC27Q9C0I9 530 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 PXMP2Q9NR77 195 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 POTEMA6NI47 508 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 MEIS1O00470 390 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 ZEB2O60315 1214 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 PPP1R11O60927 126 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 FAM13AO94988 1023 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 SLC9C1Q4G0N8 1177 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 OR6J1Q8NGC5 347 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 ATP6V0A1Q93050 837 aa13.87□□□□□ -0.19
SYNGAP1-207ENST00000628646 CSRNP2Q9H175 543 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 TBC1D22BQ9NU19 505 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 KIAA1024Q9UPX6 916 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 GPR25O00155 361 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 LAD1O00515 517 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 ADCY3O60266 1144 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 ATP1A3P13637 1013 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms