RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 PABPC4Q13310 644 aaKnown RBP eCLIP11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 KARSQ15046 597 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 L1TD1Q5T7N2 865 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 CST9Q5W186 159 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 GPAT2Q6NUI2 795 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 SLC30A10Q6XR72 485 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 CABP7Q86V35 215 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 LAPTM4BQ86VI4 370 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 ELOA2Q8IYF1 753 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 IGSF22Q8N9C0 903 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 LENG9Q96B70 501 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 TAAR1Q96RJ0 339 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 UIMC1Q96RL1 719 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 PYM1Q9BRP8 204 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 CCSER1Q9C0I3 900 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 KCNMB3Q9NPA1 279 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 BTBD7Q9P203 1132 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 MRE11P49959 708 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 PNOCQ13519 176 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 BAATQ14032 418 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 KANK3Q6NY19 840 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 SLFN12Q8IYM2 578 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 CEP57L1Q8IYX8 460 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 MB21D1Q8N884 522 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 IQUBQ8NA54 791 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 RNF214Q8ND24 703 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 RASSF8Q8NHQ8 419 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 CYP2W1Q8TAV3 490 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 SPIRE2Q8WWL2 714 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 PURBQ96QR8 312 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 RAB34Q9BZG1 259 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 ACAD9Q9H845 621 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 TTC12Q9H892 705 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 LRWD1Q9UFC0 647 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 USP25Q9UHP3 1055 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 HOOK1Q9UJC3 728 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 RABGAP1Q9Y3P9 1069 aa11.19□□□□□ -0.62
SOX2-OT-244ENST00000627738 RBBP6Q7Z6E9 1792 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 A0A0G2JMZ2 1700 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 IGLV3-22A0A075B6J6 115 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 A0A087WWV3 80 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 TBX3O15119 743 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 MSH4O15457 936 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 CNMDO75829 334 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 SLFN14P0C7P3 912 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 CETPP11597 493 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 STAT6P42226 847 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 GTF2A2P52657 109 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 PDIA5Q14554 519 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 POSTNQ15063 836 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 ZRSR1Q15695 479 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 ANO6Q4KMQ2 910 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 CEP55Q53EZ4 464 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 PLA2G4DQ86XP0 818 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 RIOX2Q8IUF8 465 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 GRAMD1CQ8IYS0 662 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 CHST13Q8NET6 341 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 ETNPPLQ8TBG4 499 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 PAGE5Q96GU1 130 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 CCDC34Q96HJ3 373 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 PLIN2Q99541 437 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 PAGR1Q9BTK6 254 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 MMTAG2Q9BU76 263 aaKnown RBP11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 DISC1Q9NRI5 854 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 PCDHA12Q9UN75 941 aa11.18□□□□□ -0.62
SOX2-OT-244ENST00000627738 FRMPD4Q14CM0 1322 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 CCL15-CCL14A0A0B4J2E2 113 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 XRCC6P12956 609 aaKnown RBP eCLIP11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 EIF2AK2P19525 551 aaKnown RBP11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 AFMP43652 599 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 HUNKP57058 714 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 PGM5Q15124 567 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 STX1AQ16623 288 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 CCL15Q16663 113 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 ARHGEF16Q5VV41 709 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 RRAGBQ5VZM2 374 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 SPRYD7Q5W111 196 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 PCNX4Q63HM2 1172 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 PDXDC2PQ6P474 469 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 NCAPG2Q86XI2 1143 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 IL31RAQ8NI17 732 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 CALML4Q96GE6 196 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 FAM20AQ96MK3 541 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 RMDN3Q96TC7 470 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 MXRA8Q9BRK3 442 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 SPATC1LQ9H0A9 340 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 DNAJC25Q9H1X3 360 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 A1CFQ9NQ94 594 aaKnown RBP11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 PXMP2Q9NR77 195 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 ANO10Q9NW15 660 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 RBPJLQ9UBG7 517 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 TUBE1Q9UJT0 475 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 PCDHA5Q9Y5H7 936 aa11.17□□□□□ -0.62
SOX2-OT-244ENST00000627738 BTBD19C9JJ37 291 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 MEIS1O00470 390 aa11.16□□□□□ -0.62
SOX2-OT-244ENST00000627738 BIN1O00499 593 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms