RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 PNOCQ13519 176 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 CCL14Q16627 93 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 ELOA2Q8IYF1 753 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 IGSF22Q8N9C0 903 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 ARRDC4Q8NCT1 418 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 LENG9Q96B70 501 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 MTRQ99707 1265 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 MTMR10Q9NXD2 777 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 PRKAG2Q9UGJ0 569 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 DDX20Q9UHI6 824 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 TUBE1Q9UJT0 475 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 ABCB11O95342 1321 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 PEX10O60683 326 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 FOSP01100 380 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 HSD17B4P51659 736 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 USP11P51784 963 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 ARHGAP4P98171 946 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 GRB14Q14449 540 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 COG2Q14746 738 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 LRRC26Q2I0M4 334 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 ANO6Q4KMQ2 910 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 NAALADL2Q58DX5 795 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 MUM1L1Q5H9M0 696 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 PDXDC2PQ6P474 469 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 SASS6Q6UVJ0 657 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 DTHD1Q6ZMT9 781 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 C11orf57Q6ZUT1 292 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 SH3RF1Q7Z6J0 888 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 GRAMD1CQ8IYS0 662 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 SHCBP1Q8NEM2 672 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 GJA10Q969M2 543 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 NAP1L4Q99733 375 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 MMTAG2Q9BU76 263 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 RAVER2Q9HCJ3 691 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 COL20A1Q9P218 1284 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 CCPG1Q9ULG6 757 aa10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 MRPL11Q9Y3B7 192 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 CTDP1Q9Y5B0 961 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-223ENST00000627587 SPDYE3A6NKU9 549 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 FAM86B1E9PN63 330 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 DNM1LO00429 736 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 CFBP00751 764 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 FAM86B2P0C5J1 330 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 FDX1P10109 184 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 GCFC2P16383 781 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 WDR78Q5VTH9 848 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 OLFML2BQ68BL8 750 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 DPP9Q86TI2 863 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 MB21D1Q8N884 522 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 CNNM3Q8NE01 707 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 SPATA20Q8TB22 786 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 CCSER1Q9C0I3 900 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 SENP6Q9GZR1 1112 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 KCNMB3Q9NPA1 279 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 DDX25Q9UHL0 483 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 PNMA2Q9UL42 364 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 ZNF214Q9UL59 606 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 RIPK3Q9Y572 518 aa10.71□□□□□ -0.69
PDLIM5-223ENST00000627587 IGLV3-22A0A075B6J6 115 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 CYP3A4P08684 503 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 SLFN14P0C7P3 912 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 BMP6P22004 513 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 CNGA1P29973 690 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 CIITAP33076 1130 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 TXLNAP40222 546 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 TECP42680 631 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 SARSP49591 514 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 KARSQ15046 597 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 CALCRLQ16602 461 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 DPCR1Q3MIW9 517 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 MOXD1Q6UVY6 613 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 CPXCR1Q8N123 301 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 CYP2W1Q8TAV3 490 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 ETNPPLQ8TBG4 499 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 DHX58Q96C10 678 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 CCDC34Q96HJ3 373 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 PYM1Q9BRP8 204 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 DNAJC25Q9H1X3 360 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 HOOK1Q9UJC3 728 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 PCDHA5Q9Y5H7 936 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 KIAA1217Q5T5P2 1943 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 SPDYE16A6NNV3 312 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 GCOM1H8Y6P7 765 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 ZBED4O75132 1171 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 POLR2MP0CAP2 368 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 CASP1P29466 404 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 TXKP42681 527 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 TMEM132BQ14DG7 1078 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 ZRSR1Q15695 479 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 NT5DC1Q5TFE4 455 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 FCHSD1Q86WN1 690 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 ABRAQ8N0Z2 381 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 PAGE5Q96GU1 130 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 MROH8Q9H579 483 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 CBX8Q9HC52 389 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 BTBD7Q9P203 1132 aa10.7□□□□□ -0.7
PDLIM5-223ENST00000627587 POTEMA6NI47 508 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 BIN1O00499 593 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 ATP2A1O14983 1001 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms