RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 APBA2Q99767 749 aa5.27□□□□□ -1.57
VBP1-204ENST00000625964 APEX2Q9UBZ4 518 aa5.27□□□□□ -1.57
VBP1-204ENST00000625964 PPP1R1BQ9UD71 204 aaPredicted RBP5.27□□□□□ -1.57
VBP1-204ENST00000625964 CGGBP1Q9UFW8 167 aaPredicted RBP5.27□□□□□ -1.57
VBP1-204ENST00000625964 ZFR2Q9UPR6 939 aaKnown RBP5.27□□□□□ -1.57
VBP1-204ENST00000625964 NARSO43776 548 aaKnown RBP5.26□□□□□ -1.57
VBP1-204ENST00000625964 STK10O94804 968 aaKnown RBP5.26□□□□□ -1.57
VBP1-204ENST00000625964 PTH1RQ03431 593 aa5.26□□□□□ -1.57
VBP1-204ENST00000625964 HNRNPA0Q13151 305 aaKnown RBP5.26□□□□□ -1.57
VBP1-204ENST00000625964 NPM2Q86SE8 214 aaKnown RBP5.26□□□□□ -1.57
VBP1-204ENST00000625964 ARHGEF39Q8N4T4 335 aa5.26□□□□□ -1.57
VBP1-204ENST00000625964 MICAL1Q8TDZ2 1067 aa5.26□□□□□ -1.57
VBP1-204ENST00000625964 ZCCHC14Q8WYQ9 949 aaKnown RBP5.26□□□□□ -1.57
VBP1-204ENST00000625964 RCC1LQ96I51 464 aaKnown RBP5.26□□□□□ -1.57
VBP1-204ENST00000625964 TMEM209Q96SK2 561 aa5.26□□□□□ -1.57
VBP1-204ENST00000625964 CSRNP2Q9H175 543 aa5.26□□□□□ -1.57
VBP1-204ENST00000625964 ADAM29Q9UKF5 820 aa5.26□□□□□ -1.57
VBP1-204ENST00000625964 ZDHHC9Q9Y397 364 aa5.26□□□□□ -1.57
VBP1-204ENST00000625964 A0A087X1B8 175 aa5.25□□□□□ -1.57
VBP1-204ENST00000625964 ATP2B1P20020 1258 aa5.25□□□□□ -1.57
VBP1-204ENST00000625964 ZNF143P52747 638 aaPredicted RBP5.25□□□□□ -1.57
VBP1-204ENST00000625964 ADOQ96SZ5 270 aa5.25□□□□□ -1.57
VBP1-204ENST00000625964 ST7Q9NRC1 585 aa5.25□□□□□ -1.57
VBP1-204ENST00000625964 AKT3Q9Y243 479 aa5.25□□□□□ -1.57
VBP1-204ENST00000625964 C22orf46C9J442 243 aa5.24□□□□□ -1.57
VBP1-204ENST00000625964 NOP56O00567 594 aaKnown RBP5.24□□□□□ -1.57
VBP1-204ENST00000625964 GJB6O95452 261 aa5.24□□□□□ -1.57
VBP1-204ENST00000625964 THBDP07204 575 aa5.24□□□□□ -1.57
VBP1-204ENST00000625964 LSM12Q3MHD2 195 aaKnown RBP5.24□□□□□ -1.57
VBP1-204ENST00000625964 USP39Q53GS9 565 aaKnown RBP5.24□□□□□ -1.57
VBP1-204ENST00000625964 MRM1Q6IN84 353 aaKnown RBP5.24□□□□□ -1.57
VBP1-204ENST00000625964 CELF2-AS1Q8N7Q2 184 aa5.24□□□□□ -1.57
VBP1-204ENST00000625964 DPF3Q92784 378 aa5.24□□□□□ -1.57
VBP1-204ENST00000625964 TOE1Q96GM8 510 aaKnown RBP5.24□□□□□ -1.57
VBP1-204ENST00000625964 TRIM55Q9BYV6 548 aa5.24□□□□□ -1.57
VBP1-204ENST00000625964 CROTQ9UKG9 612 aa5.24□□□□□ -1.57
VBP1-204ENST00000625964 SUSD5O60279 629 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 KCNH1O95259 989 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 CNOT4O95628 575 aaKnown RBP5.23□□□□□ -1.57
VBP1-204ENST00000625964 GTF2F1P35269 517 aaKnown RBP eCLIP5.23□□□□□ -1.57
VBP1-204ENST00000625964 CHRNA2Q15822 529 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 DDR2Q16832 855 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 SV2CQ496J9 727 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 IGFL4Q6B9Z1 124 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 TCTN3Q6NUS6 607 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 POMZP3Q6PJE2 187 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 EEPD1Q7L9B9 569 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 CKAP2LQ8IYA6 745 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 CRACR2BQ8N4Y2 399 aaPredicted RBP5.23□□□□□ -1.57
VBP1-204ENST00000625964 ZNF513Q8N8E2 541 aaPredicted RBP5.23□□□□□ -1.57
VBP1-204ENST00000625964 BVESQ8NE79 360 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 LGR4Q9BXB1 951 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 DTLQ9NZJ0 730 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 LRP2BPQ9P2M1 347 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 ZNF652Q9Y2D9 606 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 KLF4O43474 513 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 FOXS1O43638 330 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 TRMT10BQ6PF06 316 aaKnown RBP5.23□□□□□ -1.57
VBP1-204ENST00000625964 RALYLQ86SE5 291 aaKnown RBP5.23□□□□□ -1.57
VBP1-204ENST00000625964 TEX2Q8IWB9 1127 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 ZSWIM3Q96MP5 696 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 EMC9Q9Y3B6 208 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 SLC4A7Q9Y6M7 1214 aa5.23□□□□□ -1.57
VBP1-204ENST00000625964 COMTP21964 271 aa5.22□□□□□ -1.57
VBP1-204ENST00000625964 RAB33AQ14088 237 aa5.22□□□□□ -1.57
VBP1-204ENST00000625964 GIMAP8Q8ND71 665 aaPredicted RBP5.22□□□□□ -1.57
VBP1-204ENST00000625964 COPS5Q92905 334 aa5.22□□□□□ -1.57
VBP1-204ENST00000625964 ZG16BQ96DA0 208 aa5.22□□□□□ -1.57
VBP1-204ENST00000625964 CRAMP1Q96RY5 1269 aa5.22□□□□□ -1.57
VBP1-204ENST00000625964 LMF1Q96S06 567 aa5.22□□□□□ -1.57
VBP1-204ENST00000625964 CLEC1BQ9P126 229 aa5.22□□□□□ -1.57
VBP1-204ENST00000625964 X6R8D5 127 aa5.22□□□□□ -1.57
VBP1-204ENST00000625964 U2SURPO15042 1029 aaKnown RBP5.21□□□□□ -1.58
VBP1-204ENST00000625964 CHGBP05060 677 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 ITGAVP06756 1048 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 PLS3P13797 630 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 GTF2A2P52657 109 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 SF3A1Q15459 793 aaKnown RBP5.21□□□□□ -1.58
VBP1-204ENST00000625964 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 IQCEQ6IPM2 695 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 TEPPQ6URK8 271 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 ZNF227Q86WZ6 799 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 TRIM59Q8IWR1 403 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 Q8N1Y9 231 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 GNRHR2Q96P88 292 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 HSPBP1Q9NZL4 362 aa5.21□□□□□ -1.58
VBP1-204ENST00000625964 TBX1O43435 398 aa5.2□□□□□ -1.58
VBP1-204ENST00000625964 ATXN1P54253 815 aaKnown RBP5.2□□□□□ -1.58
VBP1-204ENST00000625964 RPL11P62913 178 aaKnown RBP5.2□□□□□ -1.58
VBP1-204ENST00000625964 SCRN1Q12765 414 aa5.2□□□□□ -1.58
VBP1-204ENST00000625964 SLC10A6Q3KNW5 377 aa5.2□□□□□ -1.58
VBP1-204ENST00000625964 GTF2IRD2BQ6EKJ0 949 aa5.2□□□□□ -1.58
VBP1-204ENST00000625964 GTF2IRD2Q86UP8 949 aa5.2□□□□□ -1.58
VBP1-204ENST00000625964 BTN2A2Q8WVV5 523 aa5.2□□□□□ -1.58
VBP1-204ENST00000625964 NEU4Q8WWR8 484 aaPredicted RBP5.2□□□□□ -1.58
VBP1-204ENST00000625964 EXTL1Q92935 676 aa5.2□□□□□ -1.58
VBP1-204ENST00000625964 MRGPRX3Q96LB0 322 aa5.2□□□□□ -1.58
VBP1-204ENST00000625964 CCDC85CA6NKD9 419 aa5.19□□□□□ -1.58
VBP1-204ENST00000625964 AGRPO00253 132 aa5.19□□□□□ -1.58
VBP1-204ENST00000625964 HGSO14964 777 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms