RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 ZEB2O60315 1214 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 RGS20O76081 388 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 GH1P01241 217 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 ASGR1P07306 291 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 FDPSP14324 419 aaKnown RBP10.9□□□□□ -0.66
LINC01560-202ENST00000624822 CPT1AP50416 773 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 HMGN5P82970 282 aaKnown RBP10.9□□□□□ -0.66
LINC01560-202ENST00000624822 FSCN1Q16658 493 aaKnown RBP10.9□□□□□ -0.66
LINC01560-202ENST00000624822 XRRA1Q6P2D8 792 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 DHX37Q8IY37 1157 aaKnown RBP10.9□□□□□ -0.66
LINC01560-202ENST00000624822 OXER1Q8TDS5 423 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 DPF3Q92784 378 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 TMX3Q96JJ7 454 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 LLPHQ9BRT6 129 aaKnown RBP10.9□□□□□ -0.66
LINC01560-202ENST00000624822 PHF20Q9BVI0 1012 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 UPF3AQ9H1J1 476 aaKnown RBP10.9□□□□□ -0.66
LINC01560-202ENST00000624822 MLXIPQ9HAP2 919 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 GJB4Q9NTQ9 266 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 PKD2L1Q9P0L9 805 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 DDX41Q9UJV9 622 aaKnown RBP10.9□□□□□ -0.66
LINC01560-202ENST00000624822 Q9Y3F1 56 aa10.9□□□□□ -0.66
LINC01560-202ENST00000624822 WDR81Q562E7 1941 aa10.9□□□□□ -0.67
LINC01560-202ENST00000624822 CCDC194A0A1B0GVG4 234 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 A0A1W2PQ45 241 aaPredicted RBP10.89□□□□□ -0.67
LINC01560-202ENST00000624822 A0A1W2PQY0 241 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 MOXD2PA6NHM9 499 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 GGPS1O95749 300 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 MYL3P08590 195 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 CST5P28325 142 aaPredicted RBP10.89□□□□□ -0.67
LINC01560-202ENST00000624822 KRT2P35908 639 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 SREBF1P36956 1147 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 ACLYP53396 1101 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 ARHGAP4P98171 946 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 MTMR1Q13613 665 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 GALNT17Q6IS24 598 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 CCDC62Q6P9F0 684 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 FAM177A1Q8N128 213 aaPredicted RBP10.89□□□□□ -0.67
LINC01560-202ENST00000624822 DAGLBQ8NCG7 672 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 KLHDC9Q8NEP7 349 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 GPRASP2Q96D09 838 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 GLT1D1Q96MS3 346 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 INPP4AQ96PE3 977 aaPredicted RBP10.89□□□□□ -0.67
LINC01560-202ENST00000624822 TSEN34Q9BSV6 310 aaKnown RBP10.89□□□□□ -0.67
LINC01560-202ENST00000624822 STARD7Q9NQZ5 370 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 KAT6AQ92794 2004 aa10.89□□□□□ -0.67
LINC01560-202ENST00000624822 TK2O00142 265 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 NOP56O00567 594 aaKnown RBP10.88□□□□□ -0.67
LINC01560-202ENST00000624822 TGFB3P10600 412 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 COL6A1P12109 1028 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 UBA1P22314 1058 aaKnown RBP10.88□□□□□ -0.67
LINC01560-202ENST00000624822 CHMP4BP1P59074 171 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 GUCY1B3Q02153 619 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 SP4Q02446 784 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 GNL2Q13823 731 aaKnown RBP10.88□□□□□ -0.67
LINC01560-202ENST00000624822 NEDD9Q14511 834 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 NONOQ15233 471 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC01560-202ENST00000624822 CYFIP1Q7L576 1253 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 KRT25Q7Z3Z0 450 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 UBE2Q1Q7Z7E8 422 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 TBCKQ8TEA7 893 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 CDHR1Q96JP9 859 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 C8orf76Q96K31 380 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 KCNK17Q96T54 332 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 MXRA8Q9BRK3 442 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 POLR3EQ9NVU0 708 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 PHF24Q9UPV7 400 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 KIF3AQ9Y496 699 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 UBIAD1Q9Y5Z9 338 aa10.88□□□□□ -0.67
LINC01560-202ENST00000624822 MYH9P35579 1960 aaKnown RBP10.88□□□□□ -0.67
LINC01560-202ENST00000624822 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 CTAGE5O15320 804 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 EVI5O60447 810 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 MMP1P03956 469 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 MMP3P08254 477 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 ITGB5P18084 799 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 ICAM3P32942 547 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 SP2Q02086 613 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 ARHGAP1Q07960 439 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 LAMC2Q13753 1193 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 SAFBQ15424 915 aaKnown RBP eCLIP10.87□□□□□ -0.67
LINC01560-202ENST00000624822 CEP55Q53EZ4 464 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 PPP1R15BQ5SWA1 713 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 CELF3Q5SZQ8 465 aaKnown RBP10.87□□□□□ -0.67
LINC01560-202ENST00000624822 KRT40Q6A162 431 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 CXCL17Q6UXB2 119 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 SLC39A5Q6ZMH5 540 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 PIK3AP1Q6ZUJ8 805 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 PLA2G4DQ86XP0 818 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 C7orf61Q8IZ16 206 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 AFG1LQ8WV93 481 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 SPATA33Q96N06 139 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 JADE2Q9NQC1 790 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 SMC3Q9UQE7 1217 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 ATP11BQ9Y2G3 1177 aa10.87□□□□□ -0.67
LINC01560-202ENST00000624822 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.87□□□□□ -0.67
LINC01560-202ENST00000624822 A0A0U1RQG5 324 aaPredicted RBP10.86□□□□□ -0.67
LINC01560-202ENST00000624822 A6NJR5 290 aa10.86□□□□□ -0.67
LINC01560-202ENST00000624822 FAM86B1E9PN63 330 aa10.86□□□□□ -0.67
LINC01560-202ENST00000624822 DDX39AO00148 427 aaKnown RBP10.86□□□□□ -0.67
LINC01560-202ENST00000624822 MAFGO15525 162 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms