RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MAPK8IP1Q9UQF2 711 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 VWA5AO00534 786 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 PPP1R12BO60237 982 aaPredicted RBP18.18■□□□□ 0.5
LDB3-208ENST00000623007 MED24O75448 989 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 ALAS1P13196 640 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 GAP43P17677 238 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 CYP11B2P19099 503 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 EPHA7Q15375 998 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 HSP90AA4PQ58FG1 418 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 DPY19L2Q6NUT2 758 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 SULF1Q8IWU6 871 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 AGBL1Q96MI9 1066 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 EIF2AK1Q9BQI3 630 aaKnown RBP18.18■□□□□ 0.5
LDB3-208ENST00000623007 TBC1D22BQ9NU19 505 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 TCEAL9Q9UHQ7 104 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 ZHX2Q9Y6X8 837 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 STAM2O75886 525 aa18.17■□□□□ 0.5
LDB3-208ENST00000623007 SSBP05455 408 aaKnown RBP eCLIP18.17■□□□□ 0.5
LDB3-208ENST00000623007 NF2P35240 595 aa18.17■□□□□ 0.5
LDB3-208ENST00000623007 FKBP15Q5T1M5 1219 aa18.17■□□□□ 0.5
LDB3-208ENST00000623007 KCNK18Q7Z418 384 aa18.17■□□□□ 0.5
LDB3-208ENST00000623007 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.17■□□□□ 0.5
LDB3-208ENST00000623007 ZC3H15Q8WU90 426 aaKnown RBP18.17■□□□□ 0.5
LDB3-208ENST00000623007 CEP63Q96MT8 703 aa18.17■□□□□ 0.5
LDB3-208ENST00000623007 NACC1Q96RE7 527 aa18.17■□□□□ 0.5
LDB3-208ENST00000623007 HSD17B14Q9BPX1 270 aa18.17■□□□□ 0.5
LDB3-208ENST00000623007 FHDC1Q9C0D6 1143 aaPredicted RBP18.17■□□□□ 0.5
LDB3-208ENST00000623007 SLC39A2Q9NP94 309 aa18.17■□□□□ 0.5
LDB3-208ENST00000623007 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.17■□□□□ 0.5
LDB3-208ENST00000623007 SEL1LQ9UBV2 794 aa18.17■□□□□ 0.5
LDB3-208ENST00000623007 ASTN2O75129 1339 aaPredicted RBP18.17■□□□□ 0.5
LDB3-208ENST00000623007 E9PMD0 336 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 IPO5O00410 1097 aaKnown RBP18.16■□□□□ 0.5
LDB3-208ENST00000623007 SPATA31C1P0DKV0 1188 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 FCER1AP12319 257 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 DSG3P32926 999 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 FKBP3Q00688 224 aaKnown RBP18.16■□□□□ 0.5
LDB3-208ENST00000623007 UBXN1Q04323 297 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 ARID5BQ14865 1188 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 ECM1Q16610 540 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 ANKRD40Q6AI12 368 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 STXBP4Q6ZWJ1 553 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 TC2NQ8N9U0 490 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 DUSP9Q99956 384 aaKnown RBP18.16■□□□□ 0.5
LDB3-208ENST00000623007 TUBGCP2Q9BSJ2 902 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 COL4A3BPQ9Y5P4 624 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 PARP14Q460N5 1801 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 PHIPQ8WWQ0 1821 aa18.16■□□□□ 0.5
LDB3-208ENST00000623007 EPS15P42566 896 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 MAP3K9P80192 1104 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 TSR1Q2NL82 804 aaKnown RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 EDRF1Q3B7T1 1238 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 RNF207Q6ZRF8 634 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 CCDC84Q86UT8 332 aaPredicted RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 RDM1Q8NG50 284 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 TRERF1Q96PN7 1200 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 RAVER2Q9HCJ3 691 aaKnown RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 R3HCC1Q9Y3T6 440 aaKnown RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 UBIAD1Q9Y5Z9 338 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 CSADQ9Y600 493 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 TRIM49BA6NDI0 452 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 MFAP3LO75121 409 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 TBCAO75347 108 aaKnown RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 POTEIP0CG38 1075 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 TNNT1P13805 278 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 STAT3P40763 770 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 MTIF2P46199 727 aaKnown RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 IREB2P48200 963 aaKnown RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 HERC4Q5GLZ8 1057 aaPredicted RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 FIGNQ5HY92 759 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 POTEGQ6S5H5 508 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 POTEEQ6S8J3 1075 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 SAMD1Q6SPF0 538 aaPredicted RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 CATSPERGQ6ZRH7 1159 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 USP50Q70EL3 339 aaPredicted RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 IRF2BP1Q8IU81 584 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 MB21D1Q8N884 522 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 SYTL5Q8TDW5 730 aaPredicted RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 TBC1D5Q92609 795 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 ZKSCAN4Q969J2 545 aaPredicted RBP18.15■□□□□ 0.5
LDB3-208ENST00000623007 CDHR1Q96JP9 859 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 VPS16Q9H269 839 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 JADE2Q9NQC1 790 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 AFG3L2Q9Y4W6 797 aa18.15■□□□□ 0.5
LDB3-208ENST00000623007 TEX33O43247 280 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 FECHP22830 423 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 B3GNT9Q6UX72 402 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 NYAP1Q6ZVC0 841 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 TMTC1Q8IUR5 882 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 CNOT6LQ96LI5 555 aaKnown RBP18.14■□□□□ 0.49
LDB3-208ENST00000623007 TEX13BQ9BXU2 312 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 OLFML3Q9NRN5 406 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 TAB2Q9NYJ8 693 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 RNF181Q9P0P0 153 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 ODF2LQ9ULJ1 636 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 UBE4BO95155 1302 aa18.14■□□□□ 0.49
LDB3-208ENST00000623007 NFIBO00712 420 aa18.13■□□□□ 0.49
LDB3-208ENST00000623007 DKC1O60832 514 aaKnown RBP eCLIP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms