RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 RAD51AP2Q09MP3 1159 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 LMNTD2Q8IXW0 634 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 GLIS3Q8NEA6 775 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 PORCNQ9H237 461 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 VCX3AQ9NNX9 186 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 UBAP1Q9NZ09 502 aa6.32□□□□□ -1.4
EBF1-211ENST00000622875 TTF2Q9UNY4 1162 aaKnown RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 TMA7Q9Y2S6 64 aaKnown RBP6.32□□□□□ -1.4
EBF1-211ENST00000622875 SMC1AQ14683 1233 aaKnown RBP6.31□□□□□ -1.4
EBF1-211ENST00000622875 ZC3H14Q6PJT7 736 aaKnown RBP6.31□□□□□ -1.4
EBF1-211ENST00000622875 ZNF804AQ7Z570 1209 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 PHLDB2Q86SQ0 1253 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 TRIM74Q86UV6 250 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 TRIM73Q86UV7 250 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 CCDC170Q8IYT3 715 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 ZNF483Q8TF39 744 aaPredicted RBP6.31□□□□□ -1.4
EBF1-211ENST00000622875 WNT8AQ9H1J5 351 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 NSUN3Q9H649 340 aaKnown RBP6.31□□□□□ -1.4
EBF1-211ENST00000622875 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.31□□□□□ -1.4
EBF1-211ENST00000622875 RABL2BQ9UNT1 228 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 PDGFBP01127 241 aaPredicted RBP6.31□□□□□ -1.4
EBF1-211ENST00000622875 RIPK4P57078 832 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 TUBA1BP68363 451 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 CCDC144BQ3MJ40 725 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 TUBA1AQ71U36 451 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 CCDC144CPQ8IYA2 1237 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 NETO1Q8TDF5 533 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 MSLNLQ96KJ4 702 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 NOC4LQ9BVI4 516 aaKnown RBP6.31□□□□□ -1.4
EBF1-211ENST00000622875 ARHGEF10LQ9HCE6 1279 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 RXFP3Q9NSD7 469 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 MRFAP1Q9Y605 127 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 SMCHD1A6NHR9 2005 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 RNF8O76064 485 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 TPPPO94811 219 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 ATF7P17544 494 aaPredicted RBP6.31□□□□□ -1.4
EBF1-211ENST00000622875 CYP2C18P33260 490 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 CYP2C19P33261 490 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 HERVK_113P62684 666 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 SRSF1Q07955 248 aaKnown RBP eCLIP6.31□□□□□ -1.4
EBF1-211ENST00000622875 LBX2Q6XYB7 198 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 MIGA2Q7L4E1 593 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 SPATA24Q86W54 205 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 CCDC150Q8NCX0 1101 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 PPFIBP2Q8ND30 876 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 AGBL1Q96MI9 1066 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 LUC7L2Q9Y383 392 aaKnown RBP6.31□□□□□ -1.4
EBF1-211ENST00000622875 MYH13Q9UKX3 1938 aa6.31□□□□□ -1.4
EBF1-211ENST00000622875 SMTNL1A8MU46 457 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 PCCAP05165 728 aaPredicted RBP6.3□□□□□ -1.4
EBF1-211ENST00000622875 ACTN1P12814 892 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 RANBP1P43487 201 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 SYNE3Q6ZMZ3 975 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 TEKT4Q8WW24 435 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 DDX27Q96GQ7 796 aaKnown RBP6.3□□□□□ -1.4
EBF1-211ENST00000622875 CD207Q9UJ71 328 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 MACROD2A1Z1Q3 448 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 EBAG9O00559 213 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 ARHGAP25P42331 645 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 RIPPLY3P57055 190 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 FLIIQ13045 1269 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 COASYQ13057 564 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 KBTBD12Q3ZCT8 623 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 FAM81BQ96LP2 452 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 DISC1Q9NRI5 854 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 SUGT1Q9Y2Z0 365 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 ZFYVE26Q68DK2 2539 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 DCDC2BA2VCK2 349 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 TULP2O00295 520 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 TGM1P22735 817 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 LMAN1P49257 510 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 CEP128Q6ZU80 1094 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 RBM12BQ8IXT5 1001 aaKnown RBP6.3□□□□□ -1.4
EBF1-211ENST00000622875 DTWD2Q8NBA8 298 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 KCNG4Q8TDN1 519 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 KRT82Q9NSB4 513 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 ANKRD17O75179 2603 aaKnown RBP6.3□□□□□ -1.4
EBF1-211ENST00000622875 CNMDO75829 334 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 RARBP10826 455 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 TTLL4Q14679 1199 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 CWF19L1Q69YN2 538 aaKnown RBP6.3□□□□□ -1.4
EBF1-211ENST00000622875 APOBEC3HQ6NTF7 200 aaKnown RBP6.3□□□□□ -1.4
EBF1-211ENST00000622875 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.3□□□□□ -1.4
EBF1-211ENST00000622875 ANKRD13BQ86YJ7 626 aa6.3□□□□□ -1.4
EBF1-211ENST00000622875 NEMFO60524 1076 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 ELF1P32519 619 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 CA8P35219 290 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 DEUP1Q05D60 604 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 Q3C1V9 767 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 CATIPQ7Z7H3 387 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 PIAS4Q8N2W9 510 aaPredicted RBP6.29□□□□□ -1.4
EBF1-211ENST00000622875 LRRC43Q8N309 656 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 C1orf131Q8NDD1 294 aaKnown RBP6.29□□□□□ -1.4
EBF1-211ENST00000622875 UPF3AQ9H1J1 476 aaKnown RBP6.29□□□□□ -1.4
EBF1-211ENST00000622875 HIPK3Q9H422 1215 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 FSD2A1L4K1 749 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 CHUKO15111 745 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 TUBBP07437 444 aa6.29□□□□□ -1.4
EBF1-211ENST00000622875 AOC1P19801 751 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms