RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 TXNDC16Q9P2K2 825 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 HMGB1P1B2RPK0 211 aaPredicted RBP11.38□□□□□ -0.59
COL25A1-209ENST00000622134 TADA3O75528 432 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 SKIP12755 728 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
COL25A1-209ENST00000622134 NNTQ13423 1086 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 DIXDC1Q155Q3 683 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 TTC19Q6DKK2 380 aaPredicted RBP11.38□□□□□ -0.59
COL25A1-209ENST00000622134 PPP1R2P3Q6NXS1 205 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 GPBP1Q86WP2 473 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 PARP9Q8IXQ6 854 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 CSGALNACT2Q8N6G5 542 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 CELF1Q92879 486 aaKnown RBP11.38□□□□□ -0.59
COL25A1-209ENST00000622134 ZMAT2Q96NC0 199 aaKnown RBP11.38□□□□□ -0.59
COL25A1-209ENST00000622134 VPS33BQ9H267 617 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 KCNF1Q9H3M0 494 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 PARP2Q9UGN5 583 aa11.38□□□□□ -0.59
COL25A1-209ENST00000622134 CEP104O60308 925 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 PFKFB2O60825 505 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 ALDH1A1P00352 501 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 CHRNA5P30532 468 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 RWDD2BP57060 319 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 GPSM2P81274 684 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 ALCAMQ13740 583 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 NOSTRINQ8IVI9 506 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 VSTM4Q8IW00 320 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 ST7Q9NRC1 585 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 FANCLQ9NW38 375 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 PFKFB1P16118 471 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 NR1D1P20393 614 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 LONP1P36776 959 aaKnown RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 DYNLL1P63167 89 aaKnown RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 PDZD4Q76G19 769 aaPredicted RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 PRPF38AQ8NAV1 312 aaKnown RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 NSUN6Q8TEA1 469 aaKnown RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 PHKBQ93100 1093 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 OTUD5Q96G74 571 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 USP28Q96RU2 1077 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 EPN1Q9Y6I3 576 aaPredicted RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 PPRC1Q5VV67 1664 aaKnown RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 PNMA6FA0A0J9YX94 578 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 PRAMEF22A3QJZ6 481 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 DPEP1P16444 411 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 JAK3P52333 1124 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 CRYMQ14894 314 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 KCTD16Q68DU8 428 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 RSBN1LQ6PCB5 846 aaPredicted RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 CCDC25Q86WR0 208 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 MB21D1Q8N884 522 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 LPAR1Q92633 364 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 KLHL29Q96CT2 875 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 IFIH1Q9BYX4 1025 aaKnown RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 A0A0D9SFI3 127 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 POLR2DO15514 142 aaKnown RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 GUCY2FP51841 1108 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 PPP1R18Q6NYC8 613 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 MAEAQ7L5Y9 396 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 VIPAS39Q9H9C1 493 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 SEPT9Q9UHD8 586 aaPredicted RBP11.37□□□□□ -0.59
COL25A1-209ENST00000622134 NDUFB9Q9Y6M9 179 aa11.37□□□□□ -0.59
COL25A1-209ENST00000622134 UTYO14607 1347 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 HUNKP57058 714 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 IGBP1P78318 339 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 ARID5AQ03989 594 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 ANKRD13AQ8IZ07 590 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 TBC1D16Q8TBP0 767 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 MED10Q9BTT4 135 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 YIPF3Q9GZM5 350 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 NCOA5Q9HCD5 579 aaKnown RBP11.36□□□□□ -0.59
COL25A1-209ENST00000622134 RNF14Q9UBS8 474 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 ANAPC4Q9UJX5 808 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 RPS6KA1Q15418 735 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 SLC9C1Q4G0N8 1177 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 SEL1L2Q5TEA6 688 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 MYSM1Q5VVJ2 828 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 KLHL7Q8IXQ5 586 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 ACAD9Q9H845 621 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 FAF1Q9UNN5 650 aaPredicted RBP11.36□□□□□ -0.59
COL25A1-209ENST00000622134 KBTBD13C9JR72 458 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 LONRF3Q496Y0 759 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 HHIPL2Q6UWX4 724 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 GSTA5Q7RTV2 222 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 ZNF34Q8IZ26 560 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 IFT122Q9HBG6 1241 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 MRFAP1Q9Y605 127 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 FER1L4A9Z1Z3 1794 aa11.36□□□□□ -0.59
COL25A1-209ENST00000622134 ZNF233A6NK53 670 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 K7ENM7 598 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 JAK2O60674 1132 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 CAMTA2O94983 1202 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 LIFRP42702 1097 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 MYOCDQ8IZQ8 938 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 PANX2Q96RD6 677 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 C1orf112Q9NSG2 853 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 PCDHA4Q9UN74 947 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 PPP2R3BQ9Y5P8 575 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 RFX7Q2KHR2 1363 aa11.35□□□□□ -0.59
COL25A1-209ENST00000622134 MEFVO15553 781 aaPredicted RBP11.35□□□□□ -0.59
COL25A1-209ENST00000622134 OPHN1O60890 802 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms