RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 MYL5Q02045 173 aa13.9□□□□□ -0.18
SCAMP1-207ENST00000621999 NCBP1Q09161 790 aaKnown RBP13.9□□□□□ -0.18
SCAMP1-207ENST00000621999 EIF2AK1Q9BQI3 630 aaKnown RBP13.9□□□□□ -0.18
SCAMP1-207ENST00000621999 JPH1Q9HDC5 661 aaPredicted RBP13.9□□□□□ -0.18
SCAMP1-207ENST00000621999 STK17AQ9UEE5 414 aa13.9□□□□□ -0.18
SCAMP1-207ENST00000621999 MYH7P12883 1935 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 LRRIQ4A6NIV6 560 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 OAZ1P54368 228 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 ORC2Q13416 577 aaPredicted RBP13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 NOL9Q5SY16 702 aaKnown RBP13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 MFSD14CQ5VZR4 134 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 FAM114A1Q8IWE2 563 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 PAGE5Q96GU1 130 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 ZNF112Q9UJU3 913 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 MEIS2O14770 477 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 MSH4O15457 936 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 DYNC1LI2O43237 492 aaPredicted RBP13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 ADCY5O95622 1261 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 LRRC41Q15345 812 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 RBSNQ9H1K0 784 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 PXMP2Q9NR77 195 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 COL4A3BPQ9Y5P4 624 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 MAPK4P31152 587 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 JAK3P52333 1124 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 FAM26FQ5R3K3 315 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 METTL16Q86W50 562 aaKnown RBP13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 CSGALNACT2Q8N6G5 542 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 PPP1R16BQ96T49 567 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 LXNQ9BS40 222 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 PCDHA10Q9Y5I2 948 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 STRN3Q13033 797 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 PAK1Q13153 545 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 DEPTORQ8TB45 409 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 CUEDC2Q9H467 287 aa13.89□□□□□ -0.19
SCAMP1-207ENST00000621999 COL11A2P13942 1736 aaPredicted RBP13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 ALDH1A1P00352 501 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 ADORA2AP29274 412 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 PRPHP41219 470 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 QARSP47897 775 aaKnown RBP13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 FCGRTP55899 365 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 TBC1D8BQ0IIM8 1120 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 FMR1NBQ8N0W7 255 aaPredicted RBP13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 RDH13Q8NBN7 331 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 FOXN1O15353 648 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 P4HBP07237 508 aaKnown RBP13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 FBXO16Q8IX29 292 aaPredicted RBP13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 GIMAP8Q8ND71 665 aaPredicted RBP13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 CAPNS2Q96L46 248 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 TIGD1Q96MW7 591 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 NFE2L3Q9Y4A8 694 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 MYL3P08590 195 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 KRT13P13646 458 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 PTPAQ15257 358 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 CACNA2D4Q7Z3S7 1137 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 NELFBQ8WX92 580 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 CBX8Q9HC52 389 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 MYH1P12882 1939 aa13.88□□□□□ -0.19
SCAMP1-207ENST00000621999 K7ENM7 598 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 ZBTB48P10074 688 aaPredicted RBP13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 RIOX2Q8IUF8 465 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 A0A0G2JLL6 359 aaPredicted RBP13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 PSMC4P43686 418 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 CCDC173Q0VFZ6 552 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 CUL4BQ13620 913 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 PDIA5Q14554 519 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 LBX2Q6XYB7 198 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 CLEC17AQ6ZS10 378 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 TMC6Q7Z403 805 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 PRRT2Q7Z6L0 340 aaPredicted RBP13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 GTPBP4Q9BZE4 634 aaKnown RBP13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 ZNF302Q9NR11 478 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 FAM86B1E9PN63 330 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 FAM86B2P0C5J1 330 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 PGM5Q15124 567 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 SCFD2Q8WU76 684 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 BRI3BPQ8WY22 251 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 RPL13P26373 211 aaKnown RBP13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 SFNP31947 248 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 DCAF17Q5H9S7 520 aaPredicted RBP13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 MYOCDQ8IZQ8 938 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 DDX12PQ92771 950 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 GSDMAQ96QA5 445 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 MAP7D2Q96T17 732 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 MAP3K20Q9NYL2 800 aaKnown RBP13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 CYP39A1Q9NYL5 469 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 BTBD7Q9P203 1132 aa13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 ZNF215Q9UL58 517 aaPredicted RBP13.87□□□□□ -0.19
SCAMP1-207ENST00000621999 SYNRGQ9UMZ2 1314 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 TMOD1P28289 359 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 NAP1L1P55209 391 aaKnown RBP13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 CETN1Q12798 172 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 EPHA7Q15375 998 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 AXDND1Q5T1B0 1012 aaPredicted RBP13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 AKT3Q9Y243 479 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 TBX3O15119 743 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 PLA2G6O60733 806 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 C6orf222P0C671 652 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms