RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 KCNMA1Q12791 1236 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
PDPN-212ENST00000621990 LRRC41Q15345 812 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 SPA17Q15506 151 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 ARSHQ5FYA8 562 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 ZNF572Q7Z3I7 529 aaPredicted RBP10.45□□□□□ -0.74
PDPN-212ENST00000621990 C2CD5Q86YS7 1000 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 SH2D4AQ9H788 454 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 PCDHA13Q9Y5I0 950 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 KIF13BQ9NQT8 1826 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 SSU72P8A0A1W2PR75 194 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 POTEB3A0JP26 581 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 TARSL2A2RTX5 802 aaKnown RBP10.44□□□□□ -0.74
PDPN-212ENST00000621990 LRRC53A6NM62 1247 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 FAM196BA6NMK8 535 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 POTECB2RU33 542 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 PJA2O43164 708 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 MARCH6O60337 910 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 ENTPD3O75355 529 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 MED24O75448 989 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 FOSP01100 380 aaPredicted RBP10.44□□□□□ -0.74
PDPN-212ENST00000621990 PRLRP16471 622 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 KIF11P52732 1056 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 CYP27A1Q02318 531 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 CKAP4Q07065 602 aaKnown RBP10.44□□□□□ -0.74
PDPN-212ENST00000621990 TCP10Q12799 353 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 HAUS3Q68CZ6 603 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 PDXDC1Q6P996 788 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 POTEBQ6S5H4 581 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 HDXQ7Z353 690 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 TRIM59Q8IWR1 403 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 SCFD1Q8WVM8 642 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 SECISBP2LQ93073 1101 aaKnown RBP10.44□□□□□ -0.74
PDPN-212ENST00000621990 FGFBP2Q9BYJ0 223 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 GBP3Q9H0R5 595 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 DUSP10Q9Y6W6 482 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 PIK3CDO00329 1044 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 NDUFB10O96000 172 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 USP14P54578 494 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 ABCB5Q2M3G0 1257 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 EDRF1Q3B7T1 1238 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 HGSNATQ68CP4 663 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 GPBP1Q86WP2 473 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 KCTD17Q8N5Z5 321 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 TRIM58Q8NG06 486 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 C7orf43Q8WVR3 580 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 MMS19Q96T76 1030 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 IFIH1Q9BYX4 1025 aaKnown RBP10.44□□□□□ -0.74
PDPN-212ENST00000621990 NUCKS1Q9H1E3 243 aaKnown RBP10.44□□□□□ -0.74
PDPN-212ENST00000621990 MMRN2Q9H8L6 949 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 CEP72Q9P209 647 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 JRKLQ9Y4A0 524 aa10.44□□□□□ -0.74
PDPN-212ENST00000621990 OPLAHO14841 1288 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 NOL4O94818 638 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 SPATA31C1P0DKV0 1188 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 RPA1P27694 616 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 EIF4A3P38919 411 aaKnown RBP10.43□□□□□ -0.74
PDPN-212ENST00000621990 ITIH3Q06033 890 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 ZNF771Q7L3S4 317 aaPredicted RBP10.43□□□□□ -0.74
PDPN-212ENST00000621990 KRT26Q7Z3Y9 468 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 CATSPER3Q86XQ3 398 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 FAM20AQ96MK3 541 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 ABCB6Q9NP58 842 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 USO1O60763 962 aaKnown RBP10.43□□□□□ -0.74
PDPN-212ENST00000621990 CYP3A4P08684 503 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 RHOXF2BP0C7M4 288 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 OAS2P29728 719 aaKnown RBP10.43□□□□□ -0.74
PDPN-212ENST00000621990 CYP2C19P33261 490 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 SYDE2Q5VT97 1194 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 RRAGAQ7L523 313 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 EPM2AIP1Q7L775 607 aaPredicted RBP10.43□□□□□ -0.74
PDPN-212ENST00000621990 FBXO11Q86XK2 927 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 SYT2Q8N9I0 419 aaPredicted RBP10.43□□□□□ -0.74
PDPN-212ENST00000621990 NEK11Q8NG66 645 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 ZNF622Q969S3 477 aaKnown RBP eCLIP10.43□□□□□ -0.74
PDPN-212ENST00000621990 RHOXF2Q9BQY4 288 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 VAV3Q9UKW4 847 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 FAM184BQ9ULE4 1060 aa10.43□□□□□ -0.74
PDPN-212ENST00000621990 RBBP6Q7Z6E9 1792 aaKnown RBP10.43□□□□□ -0.74
PDPN-212ENST00000621990 POTEFA5A3E0 1075 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 FAM86B1E9PN63 330 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 TRAF5O00463 557 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 SRGAP2O75044 1071 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 FAM86B2P0C5J1 330 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 MCM3P25205 808 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 STAT3P40763 770 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 JAG1P78504 1218 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 POTEGQ6S5H5 508 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 POTEEQ6S8J3 1075 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 ERMNQ8TAM6 284 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 TRIM34Q9BYJ4 488 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 EMILIN3Q9NT22 766 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 SNX12Q9UMY4 172 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 TRAF3IP3Q9Y228 551 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 TNS1Q9HBL0 1735 aaKnown RBP10.42□□□□□ -0.74
PDPN-212ENST00000621990 NPHP3-ACAD11A0A0J9YXS1 232 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 H0YIN7 160 aa10.42□□□□□ -0.74
PDPN-212ENST00000621990 GIT2Q14161 759 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms