RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 SASH3O75995 380 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 ABL1P00519 1130 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 PPP1R2P41236 205 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 DNM2P50570 870 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 COBLL1Q53SF7 1204 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 RGMBQ6NW40 437 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 GMCL1Q96IK5 515 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 PLIN2Q99541 437 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 CHP1Q99653 195 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 REXO2Q9Y3B8 237 aaKnown RBP19.43■□□□□ 0.7
FAM3A-222ENST00000621967 EPN1Q9Y6I3 576 aaPredicted RBP19.43■□□□□ 0.7
FAM3A-222ENST00000621967 MYH7BA7E2Y1 1941 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 hCG_1984214I3L0E3 225 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 CXCL11O14625 94 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 CCNT1O60563 726 aaKnown RBP19.43■□□□□ 0.7
FAM3A-222ENST00000621967 NDUFA10O95299 355 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 SNHG28P0DPA3 235 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 CCNE1P24864 410 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 APLP1P51693 650 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 MKRN3Q13064 507 aaKnown RBP19.43■□□□□ 0.7
FAM3A-222ENST00000621967 DGKZQ13574 1117 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 BRD3Q15059 726 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 LETM2Q2VYF4 491 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 ASPRV1Q53RT3 343 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 ZNF713Q8N859 430 aaPredicted RBP19.43■□□□□ 0.7
FAM3A-222ENST00000621967 MSANTD4Q8NCY6 345 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 SLF1Q9BQI6 1058 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 TTYH3Q9C0H2 523 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 RIOX1Q9H6W3 641 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 ARFGAP3Q9NP61 516 aa19.43■□□□□ 0.7
FAM3A-222ENST00000621967 LUC7L2Q9Y383 392 aaKnown RBP19.43■□□□□ 0.7
FAM3A-222ENST00000621967 FRMPD2Q68DX3 1309 aaPredicted RBP19.42■□□□□ 0.7
FAM3A-222ENST00000621967 ZBTB48P10074 688 aaPredicted RBP19.42■□□□□ 0.7
FAM3A-222ENST00000621967 MEA1Q16626 185 aa19.42■□□□□ 0.7
FAM3A-222ENST00000621967 KCTD1Q719H9 257 aa19.42■□□□□ 0.7
FAM3A-222ENST00000621967 P2RX5Q93086 422 aa19.42■□□□□ 0.7
FAM3A-222ENST00000621967 CCDC47Q96A33 483 aaKnown RBP19.42■□□□□ 0.7
FAM3A-222ENST00000621967 MMTAG2Q9BU76 263 aaKnown RBP19.42■□□□□ 0.7
FAM3A-222ENST00000621967 EMILIN3Q9NT22 766 aa19.42■□□□□ 0.7
FAM3A-222ENST00000621967 MAGEC2Q9UBF1 373 aaPredicted RBP19.42■□□□□ 0.7
FAM3A-222ENST00000621967 SEC63Q9UGP8 760 aaKnown RBP19.42■□□□□ 0.7
FAM3A-222ENST00000621967 KCNH4Q9UQ05 1017 aa19.42■□□□□ 0.7
FAM3A-222ENST00000621967 BICDL2A1A5D9 508 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 POTEB2H3BUK9 544 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 BMP3P12645 472 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 GJA5P36382 358 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 AMPD2Q01433 879 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 ZNF543Q08ER8 600 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 SNAPC2Q13487 334 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 WHAMMP3Q1A5X7 153 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 KIAA1755Q5JYT7 1200 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 GPATCH4Q5T3I0 446 aaKnown RBP19.41■□□□□ 0.7
FAM3A-222ENST00000621967 WDR59Q6PJI9 974 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 PAXIP1Q6ZW49 1069 aaPredicted RBP19.41■□□□□ 0.7
FAM3A-222ENST00000621967 ANKZF1Q9H8Y5 726 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 RAB21Q9UL25 225 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 PTPRFP10586 1907 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 A0A0G2JLL6 359 aaPredicted RBP19.41■□□□□ 0.7
FAM3A-222ENST00000621967 WDR46O15213 610 aaKnown RBP19.41■□□□□ 0.7
FAM3A-222ENST00000621967 VCAM1P19320 739 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 PDE4DQ08499 809 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 FAM83BQ5T0W9 1011 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 SPRYD7Q5W111 196 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 ZNF662Q6ZS27 426 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 PRRT2Q7Z6L0 340 aaPredicted RBP19.41■□□□□ 0.7
FAM3A-222ENST00000621967 RASAL3Q86YV0 1011 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 CSGALNACT2Q8N6G5 542 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 TBCKQ8TEA7 893 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 HNRNPLLQ8WVV9 542 aaKnown RBP19.41■□□□□ 0.7
FAM3A-222ENST00000621967 C12orf42Q96LP6 360 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 PIGSQ96S52 555 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 TUBGCP2Q9BSJ2 902 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 FUT8Q9BYC5 575 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 GPCPD1Q9NPB8 672 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 CREBZFQ9NS37 354 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 EXOC1Q9NV70 894 aa19.41■□□□□ 0.7
FAM3A-222ENST00000621967 IKQ13123 557 aaPredicted RBP19.4■□□□□ 0.7
FAM3A-222ENST00000621967 SH3D19Q5HYK7 790 aa19.4■□□□□ 0.7
FAM3A-222ENST00000621967 GADL1Q6ZQY3 521 aa19.4■□□□□ 0.7
FAM3A-222ENST00000621967 REXO1Q8N1G1 1221 aaKnown RBP19.4■□□□□ 0.7
FAM3A-222ENST00000621967 RETREG2Q8NC44 543 aa19.4■□□□□ 0.7
FAM3A-222ENST00000621967 HAUS4Q9H6D7 363 aa19.4■□□□□ 0.7
FAM3A-222ENST00000621967 PUF60Q9UHX1 559 aaKnown RBP19.4■□□□□ 0.7
FAM3A-222ENST00000621967 GTF2A2P52657 109 aa19.39■□□□□ 0.7
FAM3A-222ENST00000621967 AMPD3Q01432 767 aa19.39■□□□□ 0.7
FAM3A-222ENST00000621967 STK4Q13043 487 aa19.39■□□□□ 0.7
FAM3A-222ENST00000621967 FAM114A1Q8IWE2 563 aa19.39■□□□□ 0.7
FAM3A-222ENST00000621967 HHIPL1Q96JK4 782 aa19.39■□□□□ 0.7
FAM3A-222ENST00000621967 MTMR9Q96QG7 549 aa19.39■□□□□ 0.7
FAM3A-222ENST00000621967 NUP58Q9BVL2 599 aa19.39■□□□□ 0.7
FAM3A-222ENST00000621967 TANGO6Q9C0B7 1094 aa19.39■□□□□ 0.7
FAM3A-222ENST00000621967 B4DLN1 442 aa19.39■□□□□ 0.69
FAM3A-222ENST00000621967 TECP42680 631 aa19.39■□□□□ 0.69
FAM3A-222ENST00000621967 ASIC1P78348 528 aa19.39■□□□□ 0.69
FAM3A-222ENST00000621967 ANKRD40Q6AI12 368 aa19.39■□□□□ 0.69
FAM3A-222ENST00000621967 POTEDQ86YR6 584 aa19.39■□□□□ 0.69
FAM3A-222ENST00000621967 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
FAM3A-222ENST00000621967 ZSWIM4Q9H7M6 989 aa19.39■□□□□ 0.69
FAM3A-222ENST00000621967 RASSF10A6NK89 507 aa19.38■□□□□ 0.69
FAM3A-222ENST00000621967 FXR2P51116 673 aaKnown RBP eCLIP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms