RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 NBPF9Q3BBW0 867 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 MYSM1Q5VVJ2 828 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 SPATA1Q5VX52 437 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 MYOCDQ8IZQ8 938 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 RHBDL2Q9NX52 303 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 SUCLA2Q9P2R7 463 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 SRP68Q9UHB9 627 aaKnown RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 NDUFB9Q9Y6M9 179 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 KCNQ3O43525 872 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 C11orf57Q6ZUT1 292 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 RAB44Q7Z6P3 723 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 CMTR1Q8N1G2 835 aaKnown RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 CNKSR1Q969H4 720 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 ZMYND12Q9H0C1 365 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 UPF3AQ9H1J1 476 aaKnown RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 BLMP54132 1417 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-210ENST00000621266 NEURL1BA8MQ27 555 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SGSM2O43147 1006 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SLC4A1P02730 911 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 GSPT2Q8IYD1 628 aaKnown RBP10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SH3GL2Q99962 352 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SLC39A2Q9NP94 309 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 FGFR1OP2Q9NVK5 253 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SFMBT1Q9UHJ3 866 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 TEKT2Q9UIF3 430 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 ZFP69BQ9UJL9 534 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 HECW2Q9P2P5 1572 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 GCC2Q8IWJ2 1684 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 BLVRAP53004 296 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SGO2Q562F6 1265 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 ARHGAP18Q8N392 663 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 RNF217Q8TC41 542 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SNRNP27Q8WVK2 155 aaKnown RBP10.68□□□□□ -0.7
COL4A6-210ENST00000621266 STOML1Q9UBI4 398 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 CLIC4Q9Y696 253 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 ABCA8O94911 1581 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 ARHGAP10A1A4S6 786 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 KITP10721 976 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 GPBP1Q86WP2 473 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 ATP6V1E2Q96A05 226 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 ANGPTL3Q9Y5C1 460 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SNX5Q9Y5X3 404 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 FAM135BQ49AJ0 1406 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 ADCY7P51828 1080 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 UBE3AQ05086 875 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 MRPL28Q13084 256 aaKnown RBP10.68□□□□□ -0.7
COL4A6-210ENST00000621266 FBXW10Q5XX13 1052 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 IL17REQ8NFR9 667 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 TTC1Q99614 292 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 ASCC2Q9H1I8 757 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-210ENST00000621266 AS3MTQ9HBK9 375 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 PPARGC1AQ9UBK2 798 aaKnown RBP10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SYNJ2BP-COX16A0A087WUM0 186 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 EXOC1LA0A1B0GW35 172 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 C21orf2O43822 256 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 ECEL1O95672 775 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 CPP00450 1065 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 MFSD14BQ5SR56 506 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 RINT1Q6NUQ1 792 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SLC30A9Q6PML9 568 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 SPATA5Q8NB90 893 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 TRIM15Q9C019 465 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 COX16Q9P0S2 106 aa10.68□□□□□ -0.7
COL4A6-210ENST00000621266 ARAP3Q8WWN8 1544 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 TMEM232C9JQI7 657 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 M0QZ92 97 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 RPN1P04843 607 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 RBM6P78332 1123 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 CEP55Q53EZ4 464 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 TPH2Q8IWU9 490 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 ZCCHC17Q9NP64 241 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 PANK4Q9NVE7 773 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 PCDHA7Q9UN72 937 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 ACSL3O95573 720 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 TECP42680 631 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 NSMFQ6X4W1 530 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 NOP9Q86U38 636 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 ICA1LQ8NDH6 482 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 DTNBP1Q96EV8 351 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 INPP5FQ9Y2H2 1132 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 ERBB4Q15303 1308 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 ERCC6L2Q5T890 1561 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 KIF1BO60333 1816 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 PGRMC1O00264 195 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 KRT8P05787 483 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 KRT25Q7Z3Z0 450 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 TDRD7Q8NHU6 1098 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 NEK9Q8TD19 979 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 RNF181Q9P0P0 153 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 STX18Q9P2W9 335 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 KDM5AP29375 1690 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 TTC37Q6PGP7 1564 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 METP08581 1390 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 CTSWP56202 376 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 AP2B1P63010 937 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 SF3B3Q15393 1217 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 TMEM60Q9H2L4 133 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 HAUS2Q9NVX0 235 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 TRAF3IP3Q9Y228 551 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms