RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 TMEM266Q2M3C6 531 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 NBPF20Q3BBV1 942 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 TAPT1Q6NXT6 567 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 TPH2Q8IWU9 490 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 LRRC71Q8N4P6 559 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 C7orf31Q8N865 590 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 CCDC148Q8NFR7 591 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 NOC3LQ8WTT2 800 aaKnown RBP5.23□□□□□ -1.57
SYCP1-210ENST00000618516 CCDC12Q8WUD4 166 aaPredicted RBP5.23□□□□□ -1.57
SYCP1-210ENST00000618516 PPM1EQ8WY54 764 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 LZTS2Q9BRK4 669 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 TMEM39AQ9NV64 488 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 LAMB1P07942 1786 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 K7ELQ4 463 aaPredicted RBP5.23□□□□□ -1.57
SYCP1-210ENST00000618516 EIF3JO75822 258 aaKnown RBP5.23□□□□□ -1.57
SYCP1-210ENST00000618516 NOVP48745 357 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 NFX1Q12986 1120 aaKnown RBP5.23□□□□□ -1.57
SYCP1-210ENST00000618516 CTTNQ14247 550 aaKnown RBP5.23□□□□□ -1.57
SYCP1-210ENST00000618516 NONOQ15233 471 aaKnown RBP eCLIP5.23□□□□□ -1.57
SYCP1-210ENST00000618516 TKFCQ3LXA3 575 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 CEP55Q53EZ4 464 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 BRDTQ58F21 947 aaPredicted RBP5.23□□□□□ -1.57
SYCP1-210ENST00000618516 LRCH2Q5VUJ6 765 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 PLA2G4FQ68DD2 849 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 VSIG10LQ86VR7 867 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 ARRDC4Q8NCT1 418 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 PIGOQ8TEQ8 1089 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 USP6NLQ92738 828 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 STAMQ92783 540 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 C11orf49Q9H6J7 331 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 DDX25Q9UHL0 483 aaKnown RBP5.23□□□□□ -1.57
SYCP1-210ENST00000618516 USP20Q9Y2K6 914 aa5.23□□□□□ -1.57
SYCP1-210ENST00000618516 FIBPO43427 364 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 FDX1P10109 184 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 ANP32AP39687 249 aaKnown RBP5.22□□□□□ -1.57
SYCP1-210ENST00000618516 IRF5Q13568 498 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 ITGA7Q13683 1181 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 MTERF2Q49AM1 385 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 PDXDC2PQ6P474 469 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 ARMC5Q96C12 935 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 RNPEPQ9H4A4 650 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 AZI2Q9H6S1 392 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 RIC8AQ9NPQ8 531 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 HDAC6Q9UBN7 1215 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 PCDHA4Q9UN74 947 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 PCDHB6Q9Y5E3 794 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 WDR19Q8NEZ3 1342 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 VWA3AA6NCI4 1184 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 H3BRB1 525 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 ATP2A1O14983 1001 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 GNRH1P01148 92 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 HOXC6P09630 235 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 FGFR4P22455 802 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 NPEPPSP55786 919 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 RTP1P59025 263 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 SEMA3FQ13275 785 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 ITGB3BPQ13352 177 aaPredicted RBP5.22□□□□□ -1.57
SYCP1-210ENST00000618516 EP400NLQ6ZTU2 488 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 CDR2LQ86X02 465 aaPredicted RBP5.22□□□□□ -1.57
SYCP1-210ENST00000618516 KCNB2Q92953 911 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 LBHD1Q9BQE6 289 aaPredicted RBP5.22□□□□□ -1.57
SYCP1-210ENST00000618516 SDF4Q9BRK5 362 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 CFHR5Q9BXR6 569 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 TMEM60Q9H2L4 133 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 TUT1Q9H6E5 874 aaKnown RBP5.22□□□□□ -1.57
SYCP1-210ENST00000618516 JPH1Q9HDC5 661 aaPredicted RBP5.22□□□□□ -1.57
SYCP1-210ENST00000618516 PAK6Q9NQU5 681 aaPredicted RBP5.22□□□□□ -1.57
SYCP1-210ENST00000618516 GABBR1Q9UBS5 961 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 DDX41Q9UJV9 622 aaKnown RBP5.22□□□□□ -1.57
SYCP1-210ENST00000618516 PRRC2BQ5JSZ5 2229 aaKnown RBP5.22□□□□□ -1.57
SYCP1-210ENST00000618516 MYO15AQ9UKN7 3530 aa5.22□□□□□ -1.57
SYCP1-210ENST00000618516 GRXCR1A8MXD5 290 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 B4DLN1 442 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 DUSP11O75319 330 aaKnown RBP5.21□□□□□ -1.57
SYCP1-210ENST00000618516 GH1P01241 217 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 MYBP10242 640 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 CSF2RAP15509 400 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 SYT1P21579 422 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 ITGB8P26012 769 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 THPOP40225 353 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 HSD17B4P51659 736 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 SF3A1Q15459 793 aaKnown RBP5.21□□□□□ -1.57
SYCP1-210ENST00000618516 DUSP28Q4G0W2 176 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 NEK8Q86SG6 692 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 TICAM2Q86XR7 235 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 MICALL1Q8N3F8 863 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 BADQ92934 168 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 ZMYND12Q9H0C1 365 aa5.21□□□□□ -1.57
SYCP1-210ENST00000618516 SEPT9Q9UHD8 586 aaPredicted RBP5.21□□□□□ -1.57
SYCP1-210ENST00000618516 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.21□□□□□ -1.57
SYCP1-210ENST00000618516 ZNFX1Q9P2E3 1918 aaKnown RBP5.21□□□□□ -1.57
SYCP1-210ENST00000618516 MSH4O15457 936 aa5.21□□□□□ -1.58
SYCP1-210ENST00000618516 TREHO43280 583 aa5.21□□□□□ -1.58
SYCP1-210ENST00000618516 VTNP04004 478 aa5.21□□□□□ -1.58
SYCP1-210ENST00000618516 COPB2P35606 906 aa5.21□□□□□ -1.58
SYCP1-210ENST00000618516 DGKDQ16760 1214 aa5.21□□□□□ -1.58
SYCP1-210ENST00000618516 TMEM132AQ24JP5 1023 aa5.21□□□□□ -1.58
SYCP1-210ENST00000618516 MYSM1Q5VVJ2 828 aa5.21□□□□□ -1.58
SYCP1-210ENST00000618516 KSR1Q8IVT5 923 aa5.21□□□□□ -1.58
SYCP1-210ENST00000618516 ABRAQ8N0Z2 381 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms