RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 BCAR3O75815 825 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 GLP2RO95838 553 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 TSPY3P0CV98 308 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 TSPY8P0CW00 308 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 HSD17B4P51659 736 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 CAMK1Q14012 370 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 LCE2DQ5TA82 110 aaPredicted RBP5.4□□□□□ -1.55
SNCA-213ENST00000618500 AFG1LQ8WV93 481 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 CLUAP1Q96AJ1 413 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 RTP3Q9BQQ7 232 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 PUS7LQ9H0K6 701 aaKnown RBP5.4□□□□□ -1.55
SNCA-213ENST00000618500 A0A0C4DFX4 3053 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 NRCAMQ92823 1304 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 NFIBO00712 420 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 HMMRO75330 724 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 C1RP00736 705 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 IFIT2P09913 472 aaKnown RBP5.4□□□□□ -1.55
SNCA-213ENST00000618500 TOP1P11387 765 aaKnown RBP5.4□□□□□ -1.55
SNCA-213ENST00000618500 MTMR3Q13615 1198 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 STXBP2Q15833 593 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 CCDC178Q5BJE1 867 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 CELF3Q5SZQ8 465 aaKnown RBP5.4□□□□□ -1.55
SNCA-213ENST00000618500 ANKRD54Q6NXT1 300 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 TEX2Q8IWB9 1127 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 DBF4BQ8NFT6 615 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 NSUN6Q8TEA1 469 aaKnown RBP5.4□□□□□ -1.55
SNCA-213ENST00000618500 ANKS1AQ92625 1134 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 WNT8BQ93098 351 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 C16orf70Q9BSU1 422 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 NACAP1Q9BZK3 213 aa5.4□□□□□ -1.55
SNCA-213ENST00000618500 CHMP4BQ9H444 224 aaKnown RBP5.4□□□□□ -1.55
SNCA-213ENST00000618500 KDM3AQ9Y4C1 1321 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 CDH23Q9H251 3354 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 GRM6O15303 877 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 RNF113AO15541 343 aaKnown RBP5.39□□□□□ -1.55
SNCA-213ENST00000618500 MS4A1P11836 297 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 DLX2Q07687 328 aaPredicted RBP5.39□□□□□ -1.55
SNCA-213ENST00000618500 ZNF528Q3MIS6 628 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 GPATCH4Q5T3I0 446 aaKnown RBP5.39□□□□□ -1.55
SNCA-213ENST00000618500 SPPL3Q8TCT6 385 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 NEK1Q96PY6 1258 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 HOMER2Q9NSB8 354 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 USTQ9Y2C2 406 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 RPS6P62753 249 aaKnown RBP5.39□□□□□ -1.55
SNCA-213ENST00000618500 ITIH3Q06033 890 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 PPARAQ07869 468 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 ZNF543Q08ER8 600 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 TRAF1Q13077 416 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 KIAA0753Q2KHM9 967 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 TAF2Q6P1X5 1199 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 XRRA1Q6P2D8 792 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 CYP26C1Q6V0L0 522 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 IFNL3Q8IZI9 196 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 ADSSL1Q8N142 457 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 TMEM105Q8N8V8 129 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 IL17RBQ9NRM6 502 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 DZANK1Q9NVP4 752 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 STK39Q9UEW8 545 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 SALL2Q9Y467 1007 aaPredicted RBP5.39□□□□□ -1.55
SNCA-213ENST00000618500 COL4A2P08572 1712 aa5.39□□□□□ -1.55
SNCA-213ENST00000618500 MAGEA9P43362 315 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 NDUFV1P49821 464 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 PLCB3Q01970 1234 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 HIC1Q14526 733 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 TPRNQ4KMQ1 711 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 CWF19L1Q69YN2 538 aaKnown RBP5.38□□□□□ -1.55
SNCA-213ENST00000618500 NSMFQ6X4W1 530 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 TSHZ1Q6ZSZ6 1077 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 SYTL5Q8TDW5 730 aaPredicted RBP5.38□□□□□ -1.55
SNCA-213ENST00000618500 DNAJC2Q99543 621 aaKnown RBP5.38□□□□□ -1.55
SNCA-213ENST00000618500 MBLAC1A4D2B0 266 aaPredicted RBP5.38□□□□□ -1.55
SNCA-213ENST00000618500 LINC01565O15544 149 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 STAG3L1P0CL83 205 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 SMIM10L2AP0DMW4 78 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 SMIM10L2BP0DMW5 78 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 AOC1P19801 751 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 PTGS1P23219 599 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 MTHFRP42898 656 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 TFAP4Q01664 338 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 MYSM1Q5VVJ2 828 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 DGLUCYQ7Z3D6 616 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 TMCO2Q7Z6W1 182 aaPredicted RBP5.38□□□□□ -1.55
SNCA-213ENST00000618500 CASP10Q92851 521 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 COPS5Q92905 334 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 MTMR8Q96EF0 704 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 ELAC1Q9H777 363 aaKnown RBP5.38□□□□□ -1.55
SNCA-213ENST00000618500 PXMP2Q9NR77 195 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 AAASQ9NRG9 546 aa5.38□□□□□ -1.55
SNCA-213ENST00000618500 GPAA1O43292 621 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ITGB1P05556 798 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 PDHBP11177 359 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ODR4Q5SWX8 454 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 KIAA1841Q6NSI8 718 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 TTC41PQ6P2S7 1318 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 MYOCDQ8IZQ8 938 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 OSBP2Q969R2 916 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 IFIH1Q9BYX4 1025 aaKnown RBP5.37□□□□□ -1.55
SNCA-213ENST00000618500 C1orf112Q9NSG2 853 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 MRPL11Q9Y3B7 192 aaKnown RBP5.37□□□□□ -1.55
SNCA-213ENST00000618500 DOCK5Q9H7D0 1870 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms