RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 IL4RP24394 825 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 HOXA13P31271 388 aaPredicted RBP13.4□□□□□ -0.26
SRRT-216ENST00000618262 GCKP35557 465 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 RANBP1P43487 201 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 NSUN2Q08J23 767 aaKnown RBP eCLIP13.4□□□□□ -0.26
SRRT-216ENST00000618262 FUT2Q10981 343 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 PKN1Q16512 942 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 QRICH1Q2TAL8 776 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 TADA2BQ86TJ2 420 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 ANKS1AQ92625 1134 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 SYAP1Q96A49 352 aaPredicted RBP13.4□□□□□ -0.26
SRRT-216ENST00000618262 C8orf76Q96K31 380 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
SRRT-216ENST00000618262 PTPN18Q99952 460 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 FTOQ9C0B1 505 aaKnown RBP eCLIP13.4□□□□□ -0.262e-6■■■■□ 19.3
SRRT-216ENST00000618262 SLC7A5P2Q9GIP4 190 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 KIAA1683Q9H0B3 1180 aa13.4□□□□□ -0.26
SRRT-216ENST00000618262 SEC63Q9UGP8 760 aaKnown RBP13.4□□□□□ -0.26
SRRT-216ENST00000618262 PASKQ96RG2 1323 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 POU5F1Q01860 360 aaKnown RBP13.39□□□□□ -0.27
SRRT-216ENST00000618262 CC2D1AQ6P1N0 951 aaPredicted RBP13.39□□□□□ -0.27
SRRT-216ENST00000618262 LRRC31Q6UY01 552 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 TSKSQ9UJT2 592 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 KIF2AO00139 706 aaPredicted RBP13.39□□□□□ -0.27
SRRT-216ENST00000618262 IFNAR1P17181 557 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 CDR1P51861 262 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 UBXN2AP68543 259 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 PPATQ06203 517 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 GNL2Q13823 731 aaKnown RBP13.39□□□□□ -0.27
SRRT-216ENST00000618262 UBE2SQ16763 222 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 RGMBQ6NW40 437 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 BRI3BPQ8WY22 251 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 SCLT1Q96NL6 688 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 SH2D4AQ9H788 454 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 PSD3Q9NYI0 1048 aa13.39□□□□□ -0.27
SRRT-216ENST00000618262 BAG4O95429 457 aaKnown RBP13.38□□□□□ -0.27
SRRT-216ENST00000618262 ALAS1P13196 640 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 RAB27AP51159 221 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 RRP36Q96EU6 259 aaKnown RBP13.38□□□□□ -0.27
SRRT-216ENST00000618262 MCM8Q9UJA3 840 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 RIPK3Q9Y572 518 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 SMCHD1A6NHR9 2005 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 NOVP48745 357 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 NAPAP54920 295 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 MPP3Q13368 585 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 GJC2Q5T442 439 aaPredicted RBP13.38□□□□□ -0.27
SRRT-216ENST00000618262 SPRYD7Q5W111 196 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 USP17L6PQ6QN14 398 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 CCDC65Q8IXS2 484 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 GMCL1P1Q8NEA9 526 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 MMADHCQ9H3L0 296 aaPredicted RBP13.38□□□□□ -0.27
SRRT-216ENST00000618262 PCDHA1Q9Y5I3 950 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 BTBD18B2RXH4 712 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 BTBD19C9JJ37 291 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 STX6O43752 255 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 SNHG28P0DPA3 235 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 NLRP5P59047 1200 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 ASPRV1Q53RT3 343 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 POTEEQ6S8J3 1075 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 GINM1Q9NU53 330 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
SRRT-216ENST00000618262 ZDHHC9Q9Y397 364 aa13.38□□□□□ -0.27
SRRT-216ENST00000618262 A0A087WUV0 522 aaPredicted RBP13.37□□□□□ -0.27
SRRT-216ENST00000618262 PLA2G4AP47712 749 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 SNAPC2Q13487 334 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 KRT40Q6A162 431 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 CCDC80Q76M96 950 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 FCHSD1Q86WN1 690 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 ANKRD13CQ8N6S4 541 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 WDR18Q9BV38 432 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 FHOD1Q9Y613 1164 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 KIF28PB7ZC32 967 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 PDHXO00330 501 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 RTN2O75298 545 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 SCG2P13521 617 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 NOL9Q5SY16 702 aaKnown RBP13.37□□□□□ -0.27
SRRT-216ENST00000618262 GPATCH4Q5T3I0 446 aaKnown RBP13.37□□□□□ -0.27
SRRT-216ENST00000618262 RASAL3Q86YV0 1011 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 SLC43A3Q8NBI5 491 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 DCAF4Q8WV16 495 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 ZBTB10Q96DT7 871 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 GMCL1Q96IK5 515 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 SLF1Q9BQI6 1058 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 JPH2Q9BR39 696 aaPredicted RBP13.37□□□□□ -0.27
SRRT-216ENST00000618262 ASCC2Q9H1I8 757 aaPredicted RBP13.37□□□□□ -0.27
SRRT-216ENST00000618262 TXNRD2Q9NNW7 524 aa13.37□□□□□ -0.27
SRRT-216ENST00000618262 IGF2BP3O00425 579 aaKnown RBP eCLIP13.36□□□□□ -0.27
SRRT-216ENST00000618262 CFBP00751 764 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms