RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 HAND2P61296 217 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 NBR1Q14596 966 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 GSE1Q14687 1217 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 MBTPS1Q14703 1052 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 STXBP2Q15833 593 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 KIAA0753Q2KHM9 967 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 TRIM71Q2Q1W2 868 aaKnown RBP9.92□□□□□ -0.82
GPC6-202ENST00000617456 TCEAL5Q5H9L2 206 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 TRAF7Q6Q0C0 670 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 SYTL5Q8TDW5 730 aaPredicted RBP9.92□□□□□ -0.82
GPC6-202ENST00000617456 RUFY2Q8WXA3 655 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 MRPL38Q96DV4 380 aaKnown RBP9.92□□□□□ -0.82
GPC6-202ENST00000617456 FBXL18Q96ME1 805 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 KATNAL1Q9BW62 490 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 KRT23Q9C075 422 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 COL20A1Q9P218 1284 aa9.92□□□□□ -0.82
GPC6-202ENST00000617456 CIZ1Q9ULV3 898 aaPredicted RBP9.92□□□□□ -0.82
GPC6-202ENST00000617456 UPP2O95045 317 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 THPOP40225 353 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 NHLH1Q02575 133 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 TRAF1Q13077 416 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 GPM6BQ13491 265 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 CDC37Q16543 378 aaPredicted RBP9.91□□□□□ -0.82
GPC6-202ENST00000617456 PUS10Q3MIT2 529 aaKnown RBP9.91□□□□□ -0.82
GPC6-202ENST00000617456 EPC2Q52LR7 807 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 TIGD5Q53EQ6 642 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 ARHGEF16Q5VV41 709 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 CWC27Q6UX04 472 aaKnown RBP9.91□□□□□ -0.82
GPC6-202ENST00000617456 FAM43BQ6ZT52 329 aaPredicted RBP9.91□□□□□ -0.82
GPC6-202ENST00000617456 SAMD3Q8N6K7 520 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 BANK1Q8NDB2 785 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 DBF4BQ8NFT6 615 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 NEK9Q8TD19 979 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 NSUN6Q8TEA1 469 aaKnown RBP9.91□□□□□ -0.82
GPC6-202ENST00000617456 IPO9Q96P70 1041 aaKnown RBP9.91□□□□□ -0.82
GPC6-202ENST00000617456 YME1L1Q96TA2 773 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 RMDN3Q96TC7 470 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 ZKSCAN3Q9BRR0 538 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 RNF39Q9H2S5 420 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 YY1AP1Q9H869 796 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 MAP3K20Q9NYL2 800 aaKnown RBP9.91□□□□□ -0.82
GPC6-202ENST00000617456 DDX41Q9UJV9 622 aaKnown RBP9.91□□□□□ -0.82
GPC6-202ENST00000617456 MRVI1Q9Y6F6 885 aa9.91□□□□□ -0.82
GPC6-202ENST00000617456 ABCB11O95342 1321 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 RSPH10B2B2RC85 870 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 DHX16O60231 1041 aaKnown RBP9.9□□□□□ -0.82
GPC6-202ENST00000617456 CSPG5O95196 566 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 F2P00734 622 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 RSPH10BP0C881 870 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 CLCN1P35523 988 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 LAMC2Q13753 1193 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 HIC1Q14526 733 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 CLUL1Q15846 466 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 ASPRV1Q53RT3 343 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 MCF2L2Q86YR7 1114 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 PPTC7Q8NI37 304 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 IWS1Q96ST2 819 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 ZSCAN10Q96SZ4 725 aaPredicted RBP9.9□□□□□ -0.82
GPC6-202ENST00000617456 VAT1LQ9HCJ6 419 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 CLDND1Q9NY35 253 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 SIP14410 1827 aa9.9□□□□□ -0.82
GPC6-202ENST00000617456 EMSYQ7Z589 1322 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 HAS3O00219 553 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 EIF3JO75822 258 aaKnown RBP9.89□□□□□ -0.83
GPC6-202ENST00000617456 CFBP00751 764 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 NR3C2P08235 984 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 CTSHP09668 335 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 MYCLP12524 364 aaPredicted RBP9.89□□□□□ -0.83
GPC6-202ENST00000617456 HTRA4P83105 476 aaPredicted RBP9.89□□□□□ -0.83
GPC6-202ENST00000617456 ZP2Q05996 745 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 TTC22Q5TAA0 569 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 HFE2Q6ZVN8 426 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 RPAINQ86UA6 219 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 TBC1D10CQ8IV04 446 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 TMEM192Q8IY95 271 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 ADGRF4Q8IZF3 695 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 PNMA1Q8ND90 353 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
GPC6-202ENST00000617456 EMID1Q96A84 441 aaPredicted RBP9.89□□□□□ -0.83
GPC6-202ENST00000617456 PABPC5Q96DU9 382 aaKnown RBP9.89□□□□□ -0.83
GPC6-202ENST00000617456 SPATA33Q96N06 139 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 SAMD11Q96NU1 681 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 MTA3Q9BTC8 594 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 NSUN3Q9H649 340 aaKnown RBP9.89□□□□□ -0.83
GPC6-202ENST00000617456 KAT14Q9H8E8 782 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 ZSWIM5Q9P217 1185 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 FAM50BQ9Y247 325 aa9.89□□□□□ -0.83
GPC6-202ENST00000617456 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 C17orf102A2RUQ5 167 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 H3BNC9 293 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 KDM4AO75164 1064 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 GGPS1O95749 300 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 TRDNQ13061 729 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 QRICH1Q2TAL8 776 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 POTEBQ6S5H4 581 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 FBXO11Q86XK2 927 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 SEPT8Q92599 483 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 ATP6V0A1Q93050 837 aa9.88□□□□□ -0.83
GPC6-202ENST00000617456 IFIH1Q9BYX4 1025 aaKnown RBP9.88□□□□□ -0.83
GPC6-202ENST00000617456 OSBPL7Q9BZF2 842 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms