RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 KINO60870 393 aaKnown RBP17.07■□□□□ 0.32
CBWD1-225ENST00000616944 TRPA1O75762 1119 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 IGHA2P01877 340 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 TXLNAP40222 546 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 CAP1Q01518 475 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 KARSQ15046 597 aaKnown RBP17.07■□□□□ 0.32
CBWD1-225ENST00000616944 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 HYIQ5T013 277 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 CCDC183Q5T5S1 534 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 CABP7Q86V35 215 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 PDILTQ8N807 584 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 LRRC15Q8TF66 581 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 SOCS4Q8WXH5 440 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 TEKT3Q9BXF9 490 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 ARHGAP39Q9C0H5 1083 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 KATNBL1Q9H079 304 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 NFASCO94856 1347 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 SP2Q02086 613 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 LONRF3Q496Y0 759 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 RBM43Q6ZSC3 357 aaKnown RBP17.07■□□□□ 0.32
CBWD1-225ENST00000616944 MSL3Q8N5Y2 521 aaKnown RBP17.07■□□□□ 0.32
CBWD1-225ENST00000616944 SYAP1Q96A49 352 aaPredicted RBP17.07■□□□□ 0.32
CBWD1-225ENST00000616944 TRIM47Q96LD4 638 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 SENP7Q9BQF6 1050 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 NUP62CLQ9H1M0 184 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 UNC45AQ9H3U1 944 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 WBP1LQ9NX94 342 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 PKD2L1Q9P0L9 805 aa17.07■□□□□ 0.32
CBWD1-225ENST00000616944 SYNGAP1Q96PV0 1343 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 SLC26A4O43511 780 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 FCGRTP55899 365 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 GRB10Q13322 594 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 PDXDC2PQ6P474 469 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 KRBA2Q6ZNG9 492 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 SEPT14Q6ZU15 432 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 ELOA2Q8IYF1 753 aaPredicted RBP17.06■□□□□ 0.32
CBWD1-225ENST00000616944 SNX29Q8TEQ0 813 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 PNMA5Q96PV4 448 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 PYM1Q9BRP8 204 aaKnown RBP17.06■□□□□ 0.32
CBWD1-225ENST00000616944 TINF2Q9BSI4 451 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 SAGE1Q9NXZ1 904 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 SLC5A4Q9NY91 659 aa17.06■□□□□ 0.32
CBWD1-225ENST00000616944 ECM2O94769 699 aaPredicted RBP17.05■□□□□ 0.32
CBWD1-225ENST00000616944 SNAI1O95863 264 aaPredicted RBP17.05■□□□□ 0.32
CBWD1-225ENST00000616944 TGFB3P10600 412 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 PSMC4P43686 418 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 SP3Q02447 781 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 ECM1Q16610 540 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 TMEM119Q4V9L6 283 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 KRT79Q5XKE5 535 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 NCAPH2Q6IBW4 605 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 EEPD1Q7L9B9 569 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 FBXO16Q8IX29 292 aaPredicted RBP17.05■□□□□ 0.32
CBWD1-225ENST00000616944 DHX58Q96C10 678 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 APBA2Q99767 749 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 USP25Q9UHP3 1055 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 ARID2Q68CP9 1835 aa17.05■□□□□ 0.32
CBWD1-225ENST00000616944 MED24O75448 989 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 ARIH2O95376 493 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 CCNE2O96020 404 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 SLFN14P0C7P3 912 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 SPATA31C1P0DKV0 1188 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 PLCG1P19174 1290 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 UBA1P22314 1058 aaKnown RBP17.04■□□□□ 0.32
CBWD1-225ENST00000616944 RPA1P27694 616 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 RGS2P41220 211 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 MAP2K1Q02750 393 aaPredicted RBP17.04■□□□□ 0.32
CBWD1-225ENST00000616944 CAMK4Q16566 473 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 HAUS3Q68CZ6 603 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 TAPT1Q6NXT6 567 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 CCDC62Q6P9F0 684 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 IQUBQ8NA54 791 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 HSD17B14Q9BPX1 270 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 BCAS3Q9H6U6 928 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 VTA1Q9NP79 307 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.04■□□□□ 0.32
CBWD1-225ENST00000616944 FLRT1Q9NZU1 646 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 CCDC39Q9UFE4 941 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 SERTAD1Q9UHV2 236 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 STK24Q9Y6E0 443 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 KDM3AQ9Y4C1 1321 aa17.04■□□□□ 0.32
CBWD1-225ENST00000616944 RBM47A0AV96 593 aaKnown RBP17.03■□□□□ 0.32
CBWD1-225ENST00000616944 DDX39AO00148 427 aaKnown RBP17.03■□□□□ 0.32
CBWD1-225ENST00000616944 CHMP2AO43633 222 aa17.03■□□□□ 0.32
CBWD1-225ENST00000616944 MDM2Q00987 491 aaPredicted RBP17.03■□□□□ 0.32
CBWD1-225ENST00000616944 KRT76Q01546 638 aa17.03■□□□□ 0.32
CBWD1-225ENST00000616944 IRF5Q13568 498 aa17.03■□□□□ 0.32
CBWD1-225ENST00000616944 OLFML2BQ68BL8 750 aa17.03■□□□□ 0.32
CBWD1-225ENST00000616944 KCNV1Q6PIU1 500 aa17.03■□□□□ 0.32
CBWD1-225ENST00000616944 SH3RF1Q7Z6J0 888 aa17.03■□□□□ 0.32
CBWD1-225ENST00000616944 CATSPER3Q86XQ3 398 aa17.03■□□□□ 0.32
CBWD1-225ENST00000616944 ERMNQ8TAM6 284 aa17.03■□□□□ 0.32
CBWD1-225ENST00000616944 CALML4Q96GE6 196 aa17.03■□□□□ 0.32
CBWD1-225ENST00000616944 EIF2AK1Q9BQI3 630 aaKnown RBP17.03■□□□□ 0.32
CBWD1-225ENST00000616944 POLR3CQ9BUI4 534 aaPredicted RBP17.03■□□□□ 0.32
CBWD1-225ENST00000616944 TNMDQ9H2S6 317 aa17.03■□□□□ 0.32
CBWD1-225ENST00000616944 DDX41Q9UJV9 622 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms