RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 LNPKQ9C0E8 428 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 SLC6A20Q9NP91 592 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 MYOTQ9UBF9 498 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 ASH2LQ9UBL3 628 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 PCDHB4Q9Y5E5 795 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 TRAV20A0A0B4J274 112 aa5.33□□□□□ -1.56
CBWD1-224ENST00000616803 RPL13P26373 211 aaKnown RBP5.33□□□□□ -1.56
CBWD1-224ENST00000616803 RBL2Q08999 1139 aa5.33□□□□□ -1.56
CBWD1-224ENST00000616803 RASGRF1Q13972 1273 aa5.33□□□□□ -1.56
CBWD1-224ENST00000616803 DCAF4Q8WV16 495 aa5.33□□□□□ -1.56
CBWD1-224ENST00000616803 ZCCHC14Q8WYQ9 949 aaKnown RBP5.33□□□□□ -1.56
CBWD1-224ENST00000616803 TRIM55Q9BYV6 548 aa5.33□□□□□ -1.56
CBWD1-224ENST00000616803 EPB41L1Q9H4G0 881 aa5.33□□□□□ -1.56
CBWD1-224ENST00000616803 DTLQ9NZJ0 730 aa5.33□□□□□ -1.56
CBWD1-224ENST00000616803 COA3Q9Y2R0 106 aaPredicted RBP5.33□□□□□ -1.56
CBWD1-224ENST00000616803 AGRPO00253 132 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 COL6A1P12109 1028 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 ATP2B1P20020 1258 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 CNR2P34972 360 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 ZFYVE27Q5T4F4 411 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 PRRT2Q7Z6L0 340 aaPredicted RBP5.32□□□□□ -1.56
CBWD1-224ENST00000616803 ZBTB38Q8NAP3 1195 aaPredicted RBP5.32□□□□□ -1.56
CBWD1-224ENST00000616803 TXNDC5Q8NBS9 432 aaKnown RBP5.32□□□□□ -1.56
CBWD1-224ENST00000616803 MBD6Q96DN6 1003 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 TOE1Q96GM8 510 aaKnown RBP5.32□□□□□ -1.56
CBWD1-224ENST00000616803 TEPSINQ96N21 525 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 RBM15Q96T37 977 aaKnown RBP eCLIP5.32□□□□□ -1.56
CBWD1-224ENST00000616803 CD244Q9BZW8 370 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 CCDC113Q9H0I3 377 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 SMOC1Q9H4F8 434 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 PCDHA8Q9Y5H6 950 aa5.32□□□□□ -1.56
CBWD1-224ENST00000616803 KCNK3O14649 394 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 DGKIO75912 1065 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 SOD2P04179 222 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 AMY2AP04746 511 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 ZNF28P17035 718 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 AMY2BP19961 511 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 GRK2P25098 689 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 IL13P35225 146 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 GRK3P35626 688 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 GPR85P60893 370 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 SSRP1Q08945 709 aaKnown RBP5.31□□□□□ -1.56
CBWD1-224ENST00000616803 TUSC3Q13454 348 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 RGL3Q3MIN7 710 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 FSTL4Q6MZW2 842 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 RSPO2Q6UXX9 243 aaPredicted RBP5.31□□□□□ -1.56
CBWD1-224ENST00000616803 DBX2Q6ZNG2 339 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 CKAP2LQ8IYA6 745 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 PCDH19Q8TAB3 1148 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 PTPN18Q99952 460 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 BDH2Q9BUT1 245 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 NTMQ9P121 344 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 CBLCQ9ULV8 474 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 PCDHA9Q9Y5H5 950 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 CCDC88BA6NC98 1476 aa5.31□□□□□ -1.56
CBWD1-224ENST00000616803 KDM2BQ8NHM5 1336 aa5.3□□□□□ -1.56
CBWD1-224ENST00000616803 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.3□□□□□ -1.56
CBWD1-224ENST00000616803 FAM90A27PA6NNH2 459 aa5.3□□□□□ -1.56
CBWD1-224ENST00000616803 IL18BPO95998 194 aa5.3□□□□□ -1.56
CBWD1-224ENST00000616803 IFRD2Q12894 506 aaPredicted RBP5.3□□□□□ -1.56
CBWD1-224ENST00000616803 SEC23AQ15436 765 aa5.3□□□□□ -1.56
CBWD1-224ENST00000616803 MTERF2Q49AM1 385 aa5.3□□□□□ -1.56
CBWD1-224ENST00000616803 IFNL3Q8IZI9 196 aa5.3□□□□□ -1.56
CBWD1-224ENST00000616803 LILRB2Q8N423 598 aa5.3□□□□□ -1.56
CBWD1-224ENST00000616803 UHMK1Q8TAS1 419 aaKnown RBP5.3□□□□□ -1.56
CBWD1-224ENST00000616803 KISS1RQ969F8 398 aaPredicted RBP5.3□□□□□ -1.56
CBWD1-224ENST00000616803 C8orf37Q96NL8 207 aa5.3□□□□□ -1.56
CBWD1-224ENST00000616803 DNAJC7Q99615 494 aa5.3□□□□□ -1.56
CBWD1-224ENST00000616803 SSBP3Q9BWW4 388 aaPredicted RBP5.3□□□□□ -1.56
CBWD1-224ENST00000616803 SNTG2Q9NY99 539 aa5.3□□□□□ -1.56
CBWD1-224ENST00000616803 TRBV23-1A0A0A0MS06 115 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 SMARCA5O60264 1052 aaPredicted RBP5.29□□□□□ -1.56
CBWD1-224ENST00000616803 B4GALT3O60512 393 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 CKMP06732 381 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 NKX3-2P78367 333 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 TBC1D10BQ4KMP7 808 aaPredicted RBP5.29□□□□□ -1.56
CBWD1-224ENST00000616803 TM4SF20Q53R12 229 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 TTLL7Q6ZT98 887 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 GGNQ86UU5 652 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 OSTM1Q86WC4 334 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 LRRC47Q8N1G4 583 aaKnown RBP5.29□□□□□ -1.56
CBWD1-224ENST00000616803 SLC7A14Q8TBB6 771 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 YTHDC1Q96MU7 727 aaKnown RBP5.29□□□□□ -1.56
CBWD1-224ENST00000616803 KANSL2Q9H9L4 492 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 CROTQ9UKG9 612 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 INVSQ9Y283 1065 aa5.29□□□□□ -1.56
CBWD1-224ENST00000616803 LOC105371045A0A1W2PR82 267 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 IQCA1LA6NCM1 817 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 CELA3BP08861 270 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 SRGAP2CP0DJJ0 459 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 PYGMP11217 842 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 FAHP16930 419 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 KCNA6P17658 529 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 PLP2Q04941 152 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 PAN2Q504Q3 1202 aaKnown RBP5.28□□□□□ -1.56
CBWD1-224ENST00000616803 UBXN11Q5T124 520 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 LIMS2Q7Z4I7 341 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 SCUBE1Q8IWY4 988 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 TTLL6Q8N841 843 aa5.28□□□□□ -1.56
CBWD1-224ENST00000616803 DTX3Q8N9I9 347 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms